Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5512 |
Symbol | |
ID | 6179128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2765160 |
End bp | 2767400 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641685267 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001812172 |
Protein GI | 172064521 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0294754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0542916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCG AACGTCCCGC CGACTCCCGC CCGCCCGCCT CCACGCCTGC CGACGACTGG CAGGATGGCG GCAGCTATTC GGCCGGCGCG CCCGAGCACG ATTTCGCGGT CCGGCGCGTG ACGCTGATCG TGCTGCTCGT CGCGGCGATC GTGCTGCCGT GCATCTACGT GTCGGTCATG GCGTACAACG ACCTGAAGGC ACGCGAAGCC GCCGCGAGCG ACGTGACGAT GCGCACCGTG CGCGTCGCCG AGGAGCATGC GCTCAAGGTG TTCGACCTGA CCGAGACGCT CGATGCGCGC ATCGTCGACC TCGTGCAGGA CATGGACGAT GCCAGCGTGC GCCGCCAGGA ATCCGACATC CACGAAGCGC TGAACACGAT CGGCGGCGGC TATCCGCAGG TGGCCGCGGT GTCGATCTTC GGCGCGAGCG GCATGTTGCT CGCGAACAGC CTCTACTATC CGGCGCCCTA TGCGTCGATC GCGAACCGCG ACGACTTCGC CGGCATTCGC GACGGCAAGG TCATCGAACA TATCTCGCGG CTGATGATGG GGCCCCTCAA GCTCGAGAAC ATCCCCGTGT TCAATACGGG CGTCGCGCGC CGTCATAGCG ACGGTTCGTT CGCCGGGATG GTGTCGATCG CGCTGAAATC GTCGTACTTC AATTCGTTCT ACCGCGAGCT CCTCGGCGGC GCGGCCACGC CCATGACGAT GGCGCTCGCG CGCTCCGACG GCGCGGTCAT CGCGTCGTAT CCGCCGCCGC CGTCGCTCGC GCACACCGAT CTCACGACCA CGTTCGGCAA CGAACGCAAC GATCCGCGCG CGGGCATCGT GCGCGTGCGC CACGACGGCG CCAGCGAGAT CGTCGCGTAC CGCCAGGTCG GCAGCTATCC CGTGTACGTG ACCTGCGCGT ACCGCACGTC GGCGATCCGG CGGGAATGGT ACGAACACCT GAGCGTGCTG GTCATCTCGA TGTTCGCGCC GTCGATCGCG CTATGGTCGG TGATCTGGCT GTCGCTGAAG CGGCTGAAGG CGGAAGAGGA GGCGTGGGAC CGCTGGCAGG CGGAGGCGTC GATGCGGCGC TCGATCGAAT CGGCGTACCG GCAGTCGCGC AAGATGCAGG CGCTCGGCAA CCTGGTCGGC AGCGTCGCGC ACGATTTCAA CAACCTGCTG ATGATCATCT CGAGCAACGT GCAGATCGCG CGGCGGCGCG GCGTCCAGCA TCTCGACAAG GAACTCGGCG CGATCGAACG CGCGCTGAAG AACGGCCAGT CGCTCACGCG CCAGCTGCTC GGCGTCGCGC GCAAGCAGCC GCTGCACAAC GAGACGATCG ACATCGGCCA ATGGGTCGGC ACGTGCCGCG AACTGCTGAA GACGTCGCTC GGGTCGAAGT CGTCGCTGGT CGTCGCGATC GAGCCCGGGG TGTGGCCGAT CCGCGTCGAT GTCGCCGAGC TCGAACTCGC GGTGATCAAT CTCGCCGTCA ACGCGCGCGA CGCGATGACG ATCGGCGGCC GCTTCACGGT CGGGGCGCGC AACGTGACGC TGCGCCGCGA GGACGGCTTT CCGCTGACCG GCGACTTCGT GCAGATCTCG CTCGACGATA CGGGCTCGGG CATGGCGCCC GAGGTGCTCG CGCGCGCGTT CGAGCCGCTG TTCACGACGA AGGCGCAGGG GATGGGAACG GGGCTCGGGC TGCCGCAGGT GTTCGCGTTC TGCGAGCGCT CGGGCGGCCT GGCGACGATC GACAGCGCGG TCGGCGCCGG CACGTCGGTG CGCCTCTATC TGCCGCGCGC ACGCGTCGAG GACATCGTCG CGCGGCCGCC GGCCGTCGCG CACGACACGA GCGCGCTCGC GGGCCTGCAC GTGCTGCTCG TCGAAGACAA CAGCGAAGTC GCTGCCGGCA CCGAAGCGCT CCTCACGCTG CTCGGGCACC GCGTCACCTA TGCGCCCACC GCCGACGACG CGTTGCGCCT GATCGAGGGC GCGGCCGCGA ACGACGCGTT CGATCTGGTC ATCTCGGATA TCCACATGCC GGGCCGCCTG AACGGCATCG ATCTCGCCGA AGCGATCGAC AAGCGGCCGG GGAAGCTGCC CGTGATCCTG GTCACGGGTT ACGCGGAGGA ACTCGACCGC ACGCGCACCG TCAACGTGCG CGTGCTGTCG AAGCCGTTCG ACATCGCGCT GCTCGACGAG ATCCTGCTCG GCATCCGCGA AGCGCGTGAT GCGCGGCACA CCGACACCTG A
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Protein sequence | MTSERPADSR PPASTPADDW QDGGSYSAGA PEHDFAVRRV TLIVLLVAAI VLPCIYVSVM AYNDLKAREA AASDVTMRTV RVAEEHALKV FDLTETLDAR IVDLVQDMDD ASVRRQESDI HEALNTIGGG YPQVAAVSIF GASGMLLANS LYYPAPYASI ANRDDFAGIR DGKVIEHISR LMMGPLKLEN IPVFNTGVAR RHSDGSFAGM VSIALKSSYF NSFYRELLGG AATPMTMALA RSDGAVIASY PPPPSLAHTD LTTTFGNERN DPRAGIVRVR HDGASEIVAY RQVGSYPVYV TCAYRTSAIR REWYEHLSVL VISMFAPSIA LWSVIWLSLK RLKAEEEAWD RWQAEASMRR SIESAYRQSR KMQALGNLVG SVAHDFNNLL MIISSNVQIA RRRGVQHLDK ELGAIERALK NGQSLTRQLL GVARKQPLHN ETIDIGQWVG TCRELLKTSL GSKSSLVVAI EPGVWPIRVD VAELELAVIN LAVNARDAMT IGGRFTVGAR NVTLRREDGF PLTGDFVQIS LDDTGSGMAP EVLARAFEPL FTTKAQGMGT GLGLPQVFAF CERSGGLATI DSAVGAGTSV RLYLPRARVE DIVARPPAVA HDTSALAGLH VLLVEDNSEV AAGTEALLTL LGHRVTYAPT ADDALRLIEG AAANDAFDLV ISDIHMPGRL NGIDLAEAID KRPGKLPVIL VTGYAEELDR TRTVNVRVLS KPFDIALLDE ILLGIREARD ARHTDT
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