| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5502 |
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| Symbol | |
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| ID | 6179458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2755067 |
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| End bp | 2756071 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641685257 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001812162 |
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| Protein GI | 172064511 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0790497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0344756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGG TGCGAATCAT TGCGGCGACC GTCGCTGCCA GCGCGGTGCT GAGCGGCTGC
GCGACCGGCC CGAACCGCAA CCCCAACGAC CCGCTCGAGC CGATGAACCG GGCGATGTAC
AAGTTCAACG ACACGGTCGA CACGAACATC GCCGTGCCGA TCGCGAAGGG TTACCAGAAG
ATCACGCCGA CGCCGATGCG CACCGCGATC AGCAATTTCT TCTCGAACCT CGGCGATCTC
GGCAACATGG CGAACAACCT GCTGCAGTTG CGCATCACCG ATGCGACGCA GGATCTGATG
CGCGTGGCGA TGAACTCGGT GTTCGGCGTC GCCGGCCTGA TCGACATCGC CACGCCTGCC
GGGCTGCCGA AGCATCACCA GGATTTCGGG CTGACGATGG CGCGCTGGGG CATGCCGTCC
GGCCCGTACC TCGTGCTGCC GGTGTTCGGG CCGAGCACGA TCCGCGACGG CGTCGGCCGC
GCGGTGGACG TCCGCTTCAA CCTGCTGAAC TACATCGAGC CGGCCGCGCG CAATCCGATG
TACATCGCGC AGTTCATCAG CGCGCGTTCG GATCTGCTCG GCGCGACCGA CCTGCTGAAG
CAGGCGGCGC TCGATCCGTA CTCGTTCGTC CGCGACGCGT ATCTGCAGCA GCGCAAGTCG
CTGACGTATC GCGGCCAGTC GGCCTCGGCC ACGCCGCCGA ACTACACCGA GCCGGGCGAG
TCGGGTGCGG TGCCGGCGGC CGCGCCGGCC GTGCCGGGCT TGCCGAACTA CGAGGATCCG
GGTGAGGCGG GCGGCGCATC GGGCGCGGCG CCGAACAACG CGCCGGCCGC GCCGGGGTTG
CCGCAGTACG ACGATCCGGG TGCGGACGGT GCGATGCCTG CGAGTGCGCC GGCTGCGGCA
CCGGTGGCTG CATCCGCTGG TGCGACGACG GCGCCGGCCG CCAACGGCGC GCCGATCGCG
CCGGCGATGC CGACGCTGCC CGCGAGCAGC CCGGCCGCGC AGTAA
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| Protein sequence | MNKVRIIAAT VAASAVLSGC ATGPNRNPND PLEPMNRAMY KFNDTVDTNI AVPIAKGYQK
ITPTPMRTAI SNFFSNLGDL GNMANNLLQL RITDATQDLM RVAMNSVFGV AGLIDIATPA
GLPKHHQDFG LTMARWGMPS GPYLVLPVFG PSTIRDGVGR AVDVRFNLLN YIEPAARNPM
YIAQFISARS DLLGATDLLK QAALDPYSFV RDAYLQQRKS LTYRGQSASA TPPNYTEPGE
SGAVPAAAPA VPGLPNYEDP GEAGGASGAA PNNAPAAPGL PQYDDPGADG AMPASAPAAA
PVAASAGATT APAANGAPIA PAMPTLPASS PAAQ
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