| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5494 |
|---|
| Symbol | |
|---|
| ID | 6181448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 2743637 |
|---|
| End bp | 2744041 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641685249 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001812154 |
|---|
| Protein GI | 172064503 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.561658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000385324 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGA AACCCGAACT CCAACTCGCC GACGTCGAGC GCATGCTCGC CGCCGCCCGC
GCGGAAGCGG AGCACCACGG CTGGGCCGTG TCGATCGCCA TCGTCGACGA CGGCGGCCAC
CTGCTCGCGT TCGCGCGTCT CGATGGCGCG TCGCCGGCCA GCAGCTACAT CGCGCACGAC
AAGGCGCGTG CGGCGGCGCT CGGCCGTCGT GAGACGAAGG CGTATGAGGA TATGATCAAC
GGTGGCCGCA CCGCGTTTCT GAGCGTGCCG TTGACGGGGT TGCTCGAAGG CGGCGTGCCG
GTCACGGTGG ACGGCCGCAT TGCGGGCGCG ATCGGTGTGT CTGGCGTAAA GTCCGAACAG
GACGCCCAGA TCGCCCGCGC CGGCACACAA AGCGTCGCGG CCTGA
|
|---|
| Protein sequence | MQTKPELQLA DVERMLAAAR AEAEHHGWAV SIAIVDDGGH LLAFARLDGA SPASSYIAHD
KARAAALGRR ETKAYEDMIN GGRTAFLSVP LTGLLEGGVP VTVDGRIAGA IGVSGVKSEQ
DAQIARAGTQ SVAA
|
|---|
| |