| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5480 |
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| Symbol | |
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| ID | 6181488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2724869 |
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| End bp | 2726620 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641685235 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001812140 |
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| Protein GI | 172064489 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0215246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAA CAAAACCCAG GCTGCGCTCC ACCCAATGGT TCGGCACGAA CGACAAGAAC
GGCTTCATGT ATCGAAGCTG GATGAAGAAC CAGGGCATCC CCGATCACGA GTTCGACGGT
CGGCCGATCA TCGGCATCTG CAACACGTGG TCCGAGCTGA CGCCGTGCAA TGCGCACTTC
CGCAAGCTCG CCGAGCACGT GAAGCGCGGG ATCTTCGAGG CGGGCGGGTT CCCGGTCGAG
TTCCCGGTGT TCTCGAACGG TGAATCGAAC CTGCGGCCGT CGGCGATGCT CACGCGCAAC
CTGGCGTCGA TGGACGTCGA GGAAGCGATC CGCGGCAATC CGATCGACGC GGTCGTGCTG
CTCGCCGGCT GCGACAAGAC GACCCCCGCG CTGCTGATGG GCGCGGCGAG CTGCGACGTG
CCGGCGATCG TCGTGTCGGG CGGCCCGATG CTGAACGGCA AGCTCGAGGG CAAGAACATC
GGGTCGGGCA CCGCCGTGTG GCAACTGCAC GAATCGCTGA AGGCGGGCGA GATCGACCTG
CATCACTTCC TGTCGGCCGA AGCCGGCATG TCGCGCTCGG CCGGCACCTG CAACACGATG
GGCACCGCGT CGACGATGGC GTGCATGGCC GAGGCGCTCG GCGTGGCGCT GCCGCACAAC
GCGGCGATCC CGGCCGTCGA TTCGCGCCGC TACGTGCTCG CGCACATGTC CGGCATCCGG
ATCGTCGAGA TGGCGCTCGA AGGGCTCGTG TTGTCGAAGG TGCTGACGCG CGCGGCGTTC
GAGAACGCGA TCCGCGCGAA CGCGGCGATC GGCGGCTCGA CCAACGCGGT GATCCACCTG
AAGGCGATCG CGGGCCGCAT CGGCGTGCCG CTCGAGCTCG AGGACTGGAT GCGCATCGGC
CGCGACACGC CGACGATCGT CGACCTTATG CCGTCAGGGC GCTTCCTGAT GGAGGAGTTC
TATTACGCTG GCGGCCTGCC GGCCGTGCTG CGCCGGCTCG GCGAAGGCGG GTTGCTGCCG
CACCCGGACG CGCTGACCGT CAACGGCAAG TCGCTGTGGG ACAACGTGCG CGAAGCGCCG
AACTACGACG ACGAGGTGAT CCGCCCGCTC GACCGGCCGC TGATCGCCGA CGGCGGGATC
TGCATCCTGC GCGGCAATCT CGCGCCGCGC GGCGCGGTGC TGAAGCCGTC GGCGGCGAGC
CCCGAGCTGC TGAAGCATCG CGGCCGCGCG GTGGTGTTCG AGAATCTCGA GCACTACAAG
GCGACGATCA ACGACGAAGC GCTCGACGTC GATGCGAGTT CGGTGATGGT GCTGAAGAAC
TGCGGGCCGC GCGGTTATCC GGGGATGGCG GAGGTCGGCA ACATGGGGCT GCCGCCGAAG
CTGCTGCGCC AGGGCGTGAA GGACATGGTG CGGATCTCCG ATGCACGGAT GAGCGGCACC
GCGTACGGCA CGGTGGTGCT GCACGTCGCG CCGGAAGCGG CCGCGGGCGG GCCGCTGGCC
GCCGTGCGCA ACGGCGACTG GATCGAGCTC GACTGCGAGG CCGGCACGCT GCACCTGGAC
ATTCCGGACG ACGAACTGCA GCGCCGCCTG TCGGACGTCG ATCCGACCGC GGCGCCGGGC
GTGGCCGCGC AGCTCGGCAA GGGCGGCTAC GCGCGGCTGT ATATCGATCA CGTGCTGCAG
GCCGACGAGG GGTGCGATCT GGACTTCCTG GTCGGCATGC GCGGCGCGGA CGTGCCGAGC
CATTCGCATT GA
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| Protein sequence | MSATKPRLRS TQWFGTNDKN GFMYRSWMKN QGIPDHEFDG RPIIGICNTW SELTPCNAHF
RKLAEHVKRG IFEAGGFPVE FPVFSNGESN LRPSAMLTRN LASMDVEEAI RGNPIDAVVL
LAGCDKTTPA LLMGAASCDV PAIVVSGGPM LNGKLEGKNI GSGTAVWQLH ESLKAGEIDL
HHFLSAEAGM SRSAGTCNTM GTASTMACMA EALGVALPHN AAIPAVDSRR YVLAHMSGIR
IVEMALEGLV LSKVLTRAAF ENAIRANAAI GGSTNAVIHL KAIAGRIGVP LELEDWMRIG
RDTPTIVDLM PSGRFLMEEF YYAGGLPAVL RRLGEGGLLP HPDALTVNGK SLWDNVREAP
NYDDEVIRPL DRPLIADGGI CILRGNLAPR GAVLKPSAAS PELLKHRGRA VVFENLEHYK
ATINDEALDV DASSVMVLKN CGPRGYPGMA EVGNMGLPPK LLRQGVKDMV RISDARMSGT
AYGTVVLHVA PEAAAGGPLA AVRNGDWIEL DCEAGTLHLD IPDDELQRRL SDVDPTAAPG
VAAQLGKGGY ARLYIDHVLQ ADEGCDLDFL VGMRGADVPS HSH
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