| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5474 |
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| Symbol | araH |
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| ID | 6180619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2717649 |
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| End bp | 2718656 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641685229 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_001812134 |
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| Protein GI | 172064483 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0452809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCC AACGCACTTC CCCGTCCCCG GATGCCACGG CCGCGCCCGC GCGAGCGCGC
GGCGGCGTGT GGCAACTGAT CAACCGCTCC GGCATCGTGA TGGTGTTTCT CGTGCTGTTC
GCGACGCTGT CGCTGACCGT GCCGGACTTC CTCACGCCGC GCAACATCCA GGGCCTCTTG
CTGTCGGTCA CGCTGATCGG TTCGATCGCG GTGACGATGA TGTTCGTGCT CGCGCTCGGC
GAAGTCGACC TGTCGGTCGC GTCGATCGTC GCGTTCTCGG GCGTGGTCGC GTCGACGCTG
ATCACCGCGA CGCACAGCGT CGTGTTCGGC ACCGTGGCCG GCATCCTCGC GGGCGGCGCG
GTCGGGCTCG TGAACGGCGT GCTGATCGCG CGCTGGCGGA TCAATTCGCT GATCGTCACG
CTCGCGATGA TGGAAGTCGT GCGCGGGCTC GCGTTCATCA CGTCGAACGG CGACGCGGTG
ATGATCTCCG AGGAGCGCTT CTTCGAACTC GGCGCCGGCT CGTTCCTCGG CATCTCGTAC
CCGATCTGGA GCAACATCGT CGGCTTCGTC GTGTTCGGCT TCCTGCTGCG CAAGACGGTG
TTCGGCAAGA ACGTGCTGGC CGTCGGCGGC AACGGCGAGG CCGCGCTGCT CGCGGGGCTG
CCGGTGATGC GCATCAAGAT CGCGGTGTTC GTGCTGCAGG GGCTCGTAAC CGGCTTCGCC
GGCGTGATGC TCGCGTCGCG GATGAGCCTC GGCGACCCGA AGACGTCGGT CGGCCTCGAG
CTCGGCGTGA TCTCCGCGTG CGTGCTCGGC GGCGTGTCGC TGACGGGCGG CGTCGCGACG
ATTTCCGGCG TGCTGGTCGG CGTGCTGATC ATGGGCTCCG TGCAGGACGC GATGAGCCTG
TTGAACGTGC CGACCTTTTA CCAATATCTG ATACGCGGCG GAATTCTGTT GCTCGCGGTG
CTGTTCGACC AGTATCGTCG CAACCAGCGG CGCGCGATGA AGATCTGA
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| Protein sequence | MQPQRTSPSP DATAAPARAR GGVWQLINRS GIVMVFLVLF ATLSLTVPDF LTPRNIQGLL
LSVTLIGSIA VTMMFVLALG EVDLSVASIV AFSGVVASTL ITATHSVVFG TVAGILAGGA
VGLVNGVLIA RWRINSLIVT LAMMEVVRGL AFITSNGDAV MISEERFFEL GAGSFLGISY
PIWSNIVGFV VFGFLLRKTV FGKNVLAVGG NGEAALLAGL PVMRIKIAVF VLQGLVTGFA
GVMLASRMSL GDPKTSVGLE LGVISACVLG GVSLTGGVAT ISGVLVGVLI MGSVQDAMSL
LNVPTFYQYL IRGGILLLAV LFDQYRRNQR RAMKI
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