| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5460 |
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| Symbol | |
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| ID | 6180582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2701347 |
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| End bp | 2702495 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641685215 |
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| Product | porin |
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| Protein accession | YP_001812120 |
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| Protein GI | 172064469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.376591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA AAACCAGGAA CGGCCTGCTG GCCGCCGGCG CCTGCTGCGC ACTGGCCGCG
CCGGGTGCGC ACGCACAGTC GAGCGTGACG CTGTACGGAA TCATCGACAC GGGCGTCGAG
TACGTGTCGC ACGCGAACGC GGCCGGCGAC CACGTGGTGC GCATGCCGGG CGTGACGGGC
GAACTGCCGT CACGCTGGGG CCTGCGCGGC ACCGAGGATC TCGGCGGCGG CTACCAGGCG
GTATTCACGC TCGAAAGCGG GTTCAACGTG CGCGGCGGCG ACCTCGGGCA GGGCGGGCGG
CTGTTCGGGC GGCAGGCGTT CGTCGGGCTG AAGAGCGGCT TCGGCACGCT CGCGTTCGGC
CGCCAGTACA CGATGACGTA TCTCGCGCTG CAGGGCGCGG ACATCATCGG CCCCGACATC
TACGGGCTCG GCTCGCTCGA CGCATACGTG CCGAACGGCC GCGCCGACAA CGCGGTGACC
TACGTCGGCA CGTATCGCGG CGTGACGCTC GGCGCCGCGT ATTCGTTCGG CCGCGACGGC
GCCGGCACCG GCAACTCGCC GGGGCAGGGC ACGTGCGCGG GGCAGGTGCC GGGCGACGCG
GTGCAATGCC GCAACTGGTC GGTGATGCTC AAGTACGACA GCGCGTATTT CGGTGCGGCG
GCGTCGTACG AGGAGCAGCG CGGCGGCACG GGCGCCGCCG CGAACTTCTT CGACGGCGTC
GCGCCGGTCG CCTTCACCAG CAGCGGCGGC AAGGACGCGC GCACGCACGT GAGCGCCTAC
GCGCAGGCGG CGGGCGCGCG CATCGGCGCG GGCTGGATCG GGCGGCGCGT GTCGACCGGT
TCGCCGGCCG CGGCCGGCGC GCATTCGGAC CTGTTCTTCC TCGGCGCGTC GTATGCGATC
AAGCCCGACT TCGTCGTCGA CGGCGAAGGC TACCGGATCG TCAACAGCGC GCACGACACG
CGCGCGACGA TGGCCACGCT GCGCGCGACC TATCTGCTGA CCAAGCGCAC TGCCGTCTAC
GCGCAATCGT CGTATCTGTG GAACAGCGCG CATGCGCGCT ACGCAGTGAG CGGCGGCGGG
GCCGGCACGA CGCCCGGTCA GGGGATGGGG CAGCTCGGCG CGATGGTCGG CGTGCGGCAC
ATGTTCTGA
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| Protein sequence | MNTKTRNGLL AAGACCALAA PGAHAQSSVT LYGIIDTGVE YVSHANAAGD HVVRMPGVTG
ELPSRWGLRG TEDLGGGYQA VFTLESGFNV RGGDLGQGGR LFGRQAFVGL KSGFGTLAFG
RQYTMTYLAL QGADIIGPDI YGLGSLDAYV PNGRADNAVT YVGTYRGVTL GAAYSFGRDG
AGTGNSPGQG TCAGQVPGDA VQCRNWSVML KYDSAYFGAA ASYEEQRGGT GAAANFFDGV
APVAFTSSGG KDARTHVSAY AQAAGARIGA GWIGRRVSTG SPAAAGAHSD LFFLGASYAI
KPDFVVDGEG YRIVNSAHDT RATMATLRAT YLLTKRTAVY AQSSYLWNSA HARYAVSGGG
AGTTPGQGMG QLGAMVGVRH MF
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