Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5451 |
Symbol | |
ID | 6179147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2690319 |
End bp | 2690939 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641685206 |
Product | 17 kDa surface antigen |
Protein accession | YP_001812111 |
Protein GI | 172064460 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.349423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.317102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCA TGCCTTCCAC CAAGACCGTT CTGTTCTCCA CGCTCGTCGC CGTGGCGGCG CTTCCGCTGA CCGCCTGCGT CGCACCCGGC TACTACGGTG CGCAACCCGG CTATCCGCAG CAGCAATATG CGACGCCCGG CTACGCGCAG CCCGCGTATT CGCAACCCGG CTACGTACAG CCGCAGCAGC CGGCTTATCC GAACCAAGCG CCGCAGTACG ACCAATACGG CAACCCGCAG CCTTACGGCG GCCAGTACGG CAACGGCTAC GGCTACGGCA CGCAATACGG CACGGTCGCG AACATCCAGC CGGTCAGCGG GTCGGTCGGC ACGTCGGGCG TGGCCGGCAC CGTCGTCGGT GCGCTGGTCG GTGGCGTGCT GGGTAACCAG TTCGGCCGCG GCCACGGCCG CGAGGCGGCG ACCGTGATCG GCGCGCTGGG CGGCGCCGTC GCCGGCAACC AGATCGGCCA GCAGATGGGC GCGGCCCAAC CGCCGAGCAG CTACCGGATC GACGTGCGCC TCAGCGACGG CTCGACGCGC TCGTTCGACG TGCAGTCTCC GGGCGACCTG CGCCCGGGCG ATCGCGTGCA GATCAACGGC AATCAGCTGT CGCGTTATTG A
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Protein sequence | MMRMPSTKTV LFSTLVAVAA LPLTACVAPG YYGAQPGYPQ QQYATPGYAQ PAYSQPGYVQ PQQPAYPNQA PQYDQYGNPQ PYGGQYGNGY GYGTQYGTVA NIQPVSGSVG TSGVAGTVVG ALVGGVLGNQ FGRGHGREAA TVIGALGGAV AGNQIGQQMG AAQPPSSYRI DVRLSDGSTR SFDVQSPGDL RPGDRVQING NQLSRY
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