| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5447 |
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| Symbol | |
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| ID | 6181362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2685787 |
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| End bp | 2686590 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641685202 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001812107 |
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| Protein GI | 172064456 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.111655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA CTGCAAAGCT CGTCGTTTCC GCGCTGGCGT TCGCGCCGCT CGTCTCGTTC
GCGCAGGACA CGGCAACGAT CCGCTGGGGC ATCGATCCCA CCTATCCGCC GTTCGAGGCG
AAGCAGCCCG ACGGCTCGCT CGCCGGCTTC GACATCGACC TGCGCGATGC GATCTGCGAG
CAGCTGCGTG CGAAGTGCGT GTGGGTCGAG CAGGGCTTCG ACGGGATGAT TCCGGCGCTG
CGCGCGCGCA AGTTCGACGT GATCATGTCC GCGATGACGG CCACCGACGA GCGGCTCAAG
CAGATCGACT TCTCGAACAA GCTGTACGCG TCGCCGGGCG CGCTCGTCGC GCCGGCCGGC
TCGAAGCTGC TGCCGACCGC GGCGTCGCTC GCCGGCAAGC GCGTCGGGAT CGACCAGGGC
ACCACGCAGG AGGCGTACGC GAAAGCCGAA TGGGCGACCA AGGGCGTGAC GATCGTGTCG
TACCAGAACC AGGACCAGGT GTATCAGGAT CTGGTGAACG GCCGTCTCGA CGCGACCTTC
CAGGACAAGA CGCAGGCCGG CTATTCGTTC CTGAAGACGC CGCGCGGCAA GGGCTACGCG
TTCGCGGGCC CCGACGTGAC CGACGTGCGC ATCACCGGCT ATGGCGTCGC GATGGGCGTG
CGCAAGGGCG ACGCCGACAT GAAGAAACGG CTGAACGACG CGATCGCCGC GATCCGCGCG
AACGGCACGT ACCAGAAGAT CGCCGCGAAA TACTTCGACT TCGACATCTA CGGCGCGAAG
CAGCAATTGA GCGCCGCGCC GTGA
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| Protein sequence | MNRTAKLVVS ALAFAPLVSF AQDTATIRWG IDPTYPPFEA KQPDGSLAGF DIDLRDAICE
QLRAKCVWVE QGFDGMIPAL RARKFDVIMS AMTATDERLK QIDFSNKLYA SPGALVAPAG
SKLLPTAASL AGKRVGIDQG TTQEAYAKAE WATKGVTIVS YQNQDQVYQD LVNGRLDATF
QDKTQAGYSF LKTPRGKGYA FAGPDVTDVR ITGYGVAMGV RKGDADMKKR LNDAIAAIRA
NGTYQKIAAK YFDFDIYGAK QQLSAAP
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