Gene BamMC406_5441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5441 
Symbol 
ID6181027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2680913 
End bp2681617 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID641685196 
ProductMOSC domain-containing protein 
Protein accessionYP_001812101 
Protein GI172064450 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.165299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG ACGCGCGACC GGCGATCGCG GTCGCCATCG CCGCGGTGCG GGTCGGCACG 
AGCCGGCCGC TGGCCGGCAC GCCGCACCTG AGTGCGATCG ACAAGCAGCC GGTCGACGCG
CGTCTGTGGC TCGGCGCACT CGGCTTCGCG GGCGACGGGC AGGCCGATGC GCGGCATCAT
GGCGGCCCCG ACAAGGCGGT CCATCACTAC GCGTACGATC ACTATCCGTG GTGGTCCGCG
CAGATCGGGG CGCGTGACGT GCTCGAGCGA CCGGGCGCCT TTGGCGAGAA CCTGTCGACG
CACGGCGTGA CCGAGCACGA CGTGTGTCTC GGCGACGTGT TCACGCTGGG CGGCGCCGTG
CTGCAGGTGT CGCAGTCGCG GCAGCCGTGC TGGAAGCTCA ATGCACGTTT CGACCATCCG
CGCATGGCGG CGCTCGTGCA GCAAAGCGGC CGGACCGGCT GGTACTACCG TGTGCTGGAC
GAAGGCTGGG TGGCGCCGGG CGATGTGCTG GCGCTGCACG AGCGCCGATA TCCGCAATGG
CCGCTGTCGA CGGTGCTCGA TGTGCTGTAC CGGCGCACGC TCGACATGGC CGCGCTCGAT
GCGCTGTGCG GCGTTCCGGT GTTGCCGCCC GGCTGGCGCA AGATGCTCGA CAAGCGCCGG
ACGGAGCGGC AGGTCGAAGA CTGGACGAAG CGGCTCGAAG GCTGA
 
Protein sequence
MSGDARPAIA VAIAAVRVGT SRPLAGTPHL SAIDKQPVDA RLWLGALGFA GDGQADARHH 
GGPDKAVHHY AYDHYPWWSA QIGARDVLER PGAFGENLST HGVTEHDVCL GDVFTLGGAV
LQVSQSRQPC WKLNARFDHP RMAALVQQSG RTGWYYRVLD EGWVAPGDVL ALHERRYPQW
PLSTVLDVLY RRTLDMAALD ALCGVPVLPP GWRKMLDKRR TERQVEDWTK RLEG