| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5431 |
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| Symbol | |
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| ID | 6179159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2672258 |
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| End bp | 2672878 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641685186 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001812091 |
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| Protein GI | 172064440 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATGTCG GTGAGCGTTT CAACAGCATT TCCCATCTCG TCGGCGCGGT GTTGTCGGTG
GCAGGGCTGG TCGCGCTGGT GACGATGGGC GCGCTCGATC GCGATCCCTA CAAGATCGTG
AGCTTCAGCG TGTACGGCGC AATGTTGATC CTGCTGTACG CGATCTCGAC GCTGTACCAC
AGCGTGCGCA ACCCGCGGCT CAAGGCGATC CTGCAGAAGT GCGACCATTC AGCCATTTAT
CTGCTGATCG CGGGCAGCTA CACGCCCTTC GCGCTTGTCA CGCTGCGCGG CCCGTGGGGC
TGGTCGCTGT TCGGCGTGAG CTGGGGGCTC GCCGCATTCG GGATCGCGCA GGAGCTCACG
CTCGGACGGC GCACGCGCAT CGTGTCGATG GTGCTGTACG TGCTGATGGG CTGGCTCGCG
CTCGTCGCGA TCCGCCCGCT GATCCATGCG TTGCCGCCTG TGGGGACCGC CTGGCTCGTG
GCCGGCGGCG TCATCTACAG CGCGGGCATC TACTTCTTCA TCAATGACGA ACGCATCCGC
CACGGGCACG GCATCTGGCA CCTGTTCGTG CTGGCCGGCA GCCTGTGCCA GTTCGTCAGT
GTCGCGATGT ACGTTGCGTG A
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| Protein sequence | MHVGERFNSI SHLVGAVLSV AGLVALVTMG ALDRDPYKIV SFSVYGAMLI LLYAISTLYH
SVRNPRLKAI LQKCDHSAIY LLIAGSYTPF ALVTLRGPWG WSLFGVSWGL AAFGIAQELT
LGRRTRIVSM VLYVLMGWLA LVAIRPLIHA LPPVGTAWLV AGGVIYSAGI YFFINDERIR
HGHGIWHLFV LAGSLCQFVS VAMYVA
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