Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5409 |
Symbol | |
ID | 6180027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2651202 |
End bp | 2652224 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641685164 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001812069 |
Protein GI | 172064418 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCG AAGCACGCCG CAATGCCGGC GCGACGGGCG ACACGCTGCT GTCCGTCGAG GATCTGAAGG TGCATTTCCG CGTGCCGCTC GGCGGCTATC CGTGGTCGCC GAAGGGCACG CTGCGCGCGG TCGACGGCGT GTCGTTCGAC GTGAAGCGCG GCGAGACGGT CGGGCTCGTC GGCGAGTCGG GCTGCGGGAA GTCGACGCTC GCGCGCGCGC TGATCGGCCT CGTGCCGATG ACGGCCGGCA CGGTGCGCTG GCGCGGCGAT GCCGTCGCGC CCGATCACCT GCGCGGCACC GCGATGCGCC GCGAAGTCCA GATGATCTTC CAGGATCCGC TCGCGTCGCT CGATCCGCGC ATGACGATCG AACAGATCGT CGCGGAGCCG CTCGTCACGC ACCACGCGGG CCTCGGCCGC ACCGAAGTGC GCCGCCGCGT GATCACGATG CTCGAGCGCG TCGGCCTGAA TGCGCATCAC TTGCTGCGCT ATCCCCACGA ATTTTCCGGC GGGCAGTGCC AGCGCGTCGG CATCGCGCGT GCGCTGATCA GCGAGCCGAA GCTCGTGATC TGCGACGAAC CCGTGTCGGC GCTCGACGTG TCGATCCAGG CGCAGATCGT GAACCTGCTG CGCGATCTGC AGCGCGACCT GTCGTTGTCC TATCTGTTCG TCGCGCACGA TCTGGCGGTG GTGAAGGCCA TCAGCCAGCG CGTGCTCGTG ATGTATCTCG GCCGCGTGAT GGAGTTCGGC ACGCGGCATG ACGTGTATGG CGTGCCGCAG CACCCGTACA CGAAGGCGCT GCTCGATGCG GCGCCGACGC CGGAGCCGGC GCGCGAGCGT GCTCGCCGTC CGATGCTGCT GGCGGGCGAG ATGCCGTCGC CGCTCAACCC GCCGTCCGGC TGCGCGTTTC GCACGCGCTG CCCGGTCGCG ATCGACGCGT GCGCGCAGGA CGTGCCGCTG CCGGAAGTGC GGCACGGCTC GGCTGCGCGT GTCGCGTGTA TCCGGGCGGG CGCGGCGGGG TGA
|
Protein sequence | MSVEARRNAG ATGDTLLSVE DLKVHFRVPL GGYPWSPKGT LRAVDGVSFD VKRGETVGLV GESGCGKSTL ARALIGLVPM TAGTVRWRGD AVAPDHLRGT AMRREVQMIF QDPLASLDPR MTIEQIVAEP LVTHHAGLGR TEVRRRVITM LERVGLNAHH LLRYPHEFSG GQCQRVGIAR ALISEPKLVI CDEPVSALDV SIQAQIVNLL RDLQRDLSLS YLFVAHDLAV VKAISQRVLV MYLGRVMEFG TRHDVYGVPQ HPYTKALLDA APTPEPARER ARRPMLLAGE MPSPLNPPSG CAFRTRCPVA IDACAQDVPL PEVRHGSAAR VACIRAGAAG
|
| |