| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5408 |
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| Symbol | |
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| ID | 6180026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2649569 |
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| End bp | 2651041 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641685163 |
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| Product | outer membrane porin |
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| Protein accession | YP_001812068 |
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| Protein GI | 172064417 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC AAAAGACGAT CGGGACGGCA TCGAAGATGC TGCTTGCATG GGGCTTGCCG
GCGCTCGCGG GCGTGTCGCT GACCGGCGTC GCGCACGCCG ACGACGCGGC CCCCGCACCG
CTGACGGTCG CGCAGGCCGC GCCGGCGGCC GGCGCGAGCT CGACCGTTGC GCAGGCAACG
ACCCCGAACG CCGTGATCAA CGCCGAAGCG ACGCAGGCCG TCACGCCGCC GGACGAGCCG
TCGGCCCAGT CGAAGTCGAA GGGCTTCATT GCCGACAGCC ACCTCGACTT CCTGTTCCGC
AACTATTCCG ACGTGCTCGA CAGCAAGGGT GGCCCGCACC GCCACGCGTG GGTGCAGGGC
GCGATGGCGA ACTTCGAGTC GGGCTTTACG ACGGGCTTGA TCGGTATCGG TTTCGATGCG
TCGCTGTATG CGGCGCTGAA GCTCGACGGC GGCCAGGGCG CCGGCAGCAT GGTGCACATC
GCGAAGGGCG GCGGTGGCGG CAACCAGCTC GCGTGGGCGT ACCCGGGCAT CTACGACATC
AAGGCGCGCA TCTCGAACAC GGTGGTCAAG TACGGTCTGC AGGCCGTCGA CAACCCGTTC
ATGGAGCAGC ACGACAACCG CGCGCTGCCG CCGACGTTCC TCGGCGCGAC GATCGTCAGC
AACGAATTCA AGAACGTGAT GCTCGAGGCC GGCAGCTTCA CGAAGACCGA CGCACGCGGT
CACACGACGC TCACCAACCT CACGACGCAA TACGGCGGCA CGCGCATCAA CCGCCTGACG
TACGTCGGCG GCACGTGGGA CTACTCGCCG AACGGCGAAG TCGCGCTGTA CGCGAACCAG
GCCGACGACG TGTGGCACCA GTACTACGCG TCGGTGAAGC ACAGCATCGG CAGCACGCAG
ACGATCAAGT GGACGGGCTT CGGCAACGTC TACTCGACGC ACGACACCGG CGACGCGCTG
CAGGGCAAGA TCGACAACAA CGCATACAGC CTGTCGCTGG CCGCTCAGCA CGGCCCGCAC
GAGCTGCTGC TCGGCTTCCA GCAGGTGCTC GGCGATCAGT TCTTCGACTA CCTGAACGAA
ACCAACGGCA TCTTCCTGAC CAACTCGATG GACGTCGACT ACAACGCGCC GCACGAAAAG
TCGCTGCAGC TGCGTTACAC GTTCTACGGC AAGGAAGCGG GCCTGCCGGG CTTCAAGGCG
ATGGTGTGGG GCGTGACGGG CTGGGGTGCG GACGGCAGCG CGGGTGCGGC GAACGATCCG
AGCAAGTCGA GCATCTACTG GGCCAACGGC GCGCCGGTGC AGGGCCGTCA CCACGAGTTC
GGCTTCATCC CGTCGTATAC GTTCCAGAGC GGCAAGCTGA AGGACACGAA GGTCACGTTC
ATCGCGATGT GGCACAACGG TTCCGCGCAC TACTCGGACG CGACGAACCG CGAGTATCGC
CTGGTCGTGA ACGTGCCGCT GCACGCGTTC TGA
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| Protein sequence | MKKQKTIGTA SKMLLAWGLP ALAGVSLTGV AHADDAAPAP LTVAQAAPAA GASSTVAQAT
TPNAVINAEA TQAVTPPDEP SAQSKSKGFI ADSHLDFLFR NYSDVLDSKG GPHRHAWVQG
AMANFESGFT TGLIGIGFDA SLYAALKLDG GQGAGSMVHI AKGGGGGNQL AWAYPGIYDI
KARISNTVVK YGLQAVDNPF MEQHDNRALP PTFLGATIVS NEFKNVMLEA GSFTKTDARG
HTTLTNLTTQ YGGTRINRLT YVGGTWDYSP NGEVALYANQ ADDVWHQYYA SVKHSIGSTQ
TIKWTGFGNV YSTHDTGDAL QGKIDNNAYS LSLAAQHGPH ELLLGFQQVL GDQFFDYLNE
TNGIFLTNSM DVDYNAPHEK SLQLRYTFYG KEAGLPGFKA MVWGVTGWGA DGSAGAANDP
SKSSIYWANG APVQGRHHEF GFIPSYTFQS GKLKDTKVTF IAMWHNGSAH YSDATNREYR
LVVNVPLHAF
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