| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5405 |
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| Symbol | |
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| ID | 6180384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2645522 |
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| End bp | 2647837 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641685160 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_001812065 |
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| Protein GI | 172064414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0461209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAC GCCGCAAATT TCTTCAGCAA ACCGCGACTT CCGGCCTCGC CGCCGCCGCG
CTGTCCGCGT TTCCGCCGAG CATCCGCCGC GCGCTCGCGA TTCCCGCGTT TCACGAAACG
GGGACCATCA AGGACGTCAA GCACGTCGTG CTGCTGATGA TGGAAAACCG CGGGTTCGAC
GGCTACTTCG GCACCTTCAA GGGCGTGCGC GGTTACGGCG ACCGCTTCGC GGTGCCGTCG
CCGAACGGCC GCGACGTATT CCACCAGACC TACACGAAAG CGACGCCCGC GACGACCATC
ACGCCGTACC ACCTCGATGC GCGCCAGGGC AACGCGCAAC GCGCGGGCGG CACACCGCAC
ACGTGGGCCG ACTCGCAGGC CGCGTGGGAC CATGGCCGGA TGAACCGCTG GCCCGACGCG
AAAACACCGC TGTCGATGGG CTATTACGAC GCGGCCGAAG TGCCGTTCCA GCGGGCGCTC
GCCGACGCGT TCACGCTGTG CGACCACTAT CACTGCGGGA TGCACACGGG CACGATCGCG
AACCGGCTGT TCTACTGGAG CGGCACCAAC GGCCCGAACG GCATCAGCCC GGCCGACGGC
AGCCGCGTGA AGCTCGCCGC GCTGAACAAC CAGTTCAACG GCGGCAACGA CATCGGCCCG
TCGAGCCAGG GCTGGACGTG GACGACCTAC GCGGACCGGC TGCAGCAGGC CGGCGTGAAC
TGGAAGGTCT ACCAGAGCCT GATCGACAAC TTCGGCTGCA ACGAGATGAT GAGCTTCCGC
CACTGGCGCG CGGCCATCGA GCAGATGCCC CCCGCACGCC GGCCCGCGTA CGTCGCGTCG
ACGGACATCA CGCAGCCGGT AACGGCGGCC GGCGCGTTCT ACGATCCGGC GATCGACGAT
CCGTTGAGCC CGCTCGCGAA GGGTTTTGGC AACACGATGC CGTACGGCTT CCTCGAAACG
TTCCGTGACG ACATCCGCAA CGGCACGCTG CCCGAGGTGT CGTGGATCAT CCCGCCGTCC
GTGTACAGCG AACATCCGGG GCCGTCGAGC CCCGCGCAGG GCGCGTGGTA CGTGCAGGCG
GTGCTCGACG CGCTGACGGC GAACCCGGAG GTATGGAGCA AGACCGTGCT GCTGATCAAC
TACGACGAGA ACGACGGCTT CTTCGACCAC ATGCCGTCGC CGGCCGTGCC GTCGCGCAAC
GCGGACGGCT CGCTCGCGGG CGGCCATACG CTCGCGGCCG CCGACGTCGC CGTCGAGTAT
CACGACTTCG CGCCGGCCAC GTCGAGCCAG CCCGCGGCCG ACGGCCGTCC GTACGGTCCG
GGCCCGCGCG TGCCGATGTG GGTCGTGTCG CCGTGGAGCC GCGGCGGCTG GGTCAATTCG
CAGGTGTTCG ACCATACGTC GACGCTGCTT TTCCTCGAGA AGCGCTTCGG CGTGGTCGAG
CCGCAGATCA GCGCGTATCG CCGCGCGGTG TGCGGCGACC TGACGAGCGC GTTCAACTTC
CGCACGCCGA ACAATGAACC TCTGCCGACG CTCGCGGGCC GCACGACGAA AAGCCAGGTC
GACGCACTGA GCGCCGCGCA GCAGGCTGCG CCGAAGATCA CGCCGCCGGC CACGCCGTCG
CTGCCCCCGC AGGCCACCGG CGTGCGCCCG TCGCGCGCGC TGCCGTACGA GCTGCATGCG
AGCGCGCAGG TCGATGCCGG CAAGGGCACC GTCACGCTGA AGTTCGCGAA CACCGGCCGC
GCGGCGGCGG TGTTCCACGT CTACGACAAG CTGCACCTCG ACCGCGTGCC GCGCCGCTAC
GTCGTCGAGC CGGGCAAGGC GCTACGCGGC GACTGGGCGG CGCTGGCCGA CGACAGCGGC
AAATACGACC TGTGGGTGCT CGGCCCGAAC GGCTATCACC GCCGCTTCAC CGGCGACCTG
GCCCGGCTGG CCGGCTGGCG GGCGGCGCAC CCGGAGATCC GGGTCGGCTA TGCGGGCGCG
AGCGGCAACC TGCATCTGCG GCTGCGCAAC GACGGCGGCA GCCCCGTGCG CTTCACGGTG
AAGTCGAACG AGGTGTACGG CGCGCTGTCC GGCCGCGGCG CGAACGACGA TCACGGCCAC
GGCAACGACA ACCGCACCGG CACGACGTGG ACCGTCACGG TGCACGCCGG CGGCCAGTCG
GAACTGCACT GGAAGCTCGA CTCGACCGGC CACTGGTACG ACTTCGTCGT CACCGCCGAC
AGCGACGCGA GCTTCTCGCG CCGCGTGGCC GGCCGCGTCG AAACGGGCCG CCACTCGGTC
AGCGACCCGG CGATGGGGCT CGCCGACCGC TTCTGA
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| Protein sequence | MTSRRKFLQQ TATSGLAAAA LSAFPPSIRR ALAIPAFHET GTIKDVKHVV LLMMENRGFD
GYFGTFKGVR GYGDRFAVPS PNGRDVFHQT YTKATPATTI TPYHLDARQG NAQRAGGTPH
TWADSQAAWD HGRMNRWPDA KTPLSMGYYD AAEVPFQRAL ADAFTLCDHY HCGMHTGTIA
NRLFYWSGTN GPNGISPADG SRVKLAALNN QFNGGNDIGP SSQGWTWTTY ADRLQQAGVN
WKVYQSLIDN FGCNEMMSFR HWRAAIEQMP PARRPAYVAS TDITQPVTAA GAFYDPAIDD
PLSPLAKGFG NTMPYGFLET FRDDIRNGTL PEVSWIIPPS VYSEHPGPSS PAQGAWYVQA
VLDALTANPE VWSKTVLLIN YDENDGFFDH MPSPAVPSRN ADGSLAGGHT LAAADVAVEY
HDFAPATSSQ PAADGRPYGP GPRVPMWVVS PWSRGGWVNS QVFDHTSTLL FLEKRFGVVE
PQISAYRRAV CGDLTSAFNF RTPNNEPLPT LAGRTTKSQV DALSAAQQAA PKITPPATPS
LPPQATGVRP SRALPYELHA SAQVDAGKGT VTLKFANTGR AAAVFHVYDK LHLDRVPRRY
VVEPGKALRG DWAALADDSG KYDLWVLGPN GYHRRFTGDL ARLAGWRAAH PEIRVGYAGA
SGNLHLRLRN DGGSPVRFTV KSNEVYGALS GRGANDDHGH GNDNRTGTTW TVTVHAGGQS
ELHWKLDSTG HWYDFVVTAD SDASFSRRVA GRVETGRHSV SDPAMGLADR F
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