| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5401 |
|---|
| Symbol | |
|---|
| ID | 6180179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 2640543 |
|---|
| End bp | 2641946 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641685156 |
|---|
| Product | citrate transporter |
|---|
| Protein accession | YP_001812061 |
|---|
| Protein GI | 172064410 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.487736 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTTTCG TGATCGTCCT CGCCGCGCTG GCGTTCCTGA TGTTCGCCGC GTATCGCGGC
TACAGCGTGA TCCTGTTCGC GCCGATCGCC GCGCTCGGCG CGGTCCTGCT GACCGACCCC
GCCGCCGTCG CACCGGTCTT CTCCGGCATC TTCATGGAGA AGATGGTCGG CTTCGTCAAA
CTCTATTTCC CGGTGTTCAT GCTCGGTGCC GTGTTCGGCA AGGTGATCGA ACTGTCCGGG
TTCTCCGAGT CGATCGTCCA TGCGGCGATC CGCTACATCG GCCGCTCGCG TGCGAACGCG
GTGATCGTCG CGGTGTGCGC GCTGCTCACC TATGGCGGCG TGTCGCTGTT CGTCGTGGTG
TTCGCGGTGT ATCCGTTCGC GGCCGAACTC TATCGCCAGA GCAACATTCC GAAACGATTG
ATGCCCGGCG CGATCGCGCT CGGCGCGTTC TCGTTCACGA TGGACTCGCT GCCGGGCACC
CCGCAGATCC AGAACATCAT CCCGACCACG TTCTTCAAGA CGACTGCGTG GGCCGCGCCG
GTGCTCGGCA CGATCGGCTC GCTGTTCATC GTCGTCGTCG GCCTCACGTA CCTGGAATGG
CGCCGCCGTT CGGCGATGGC GAAGGGCGAA GGCTACGGCA CGTCGCTCGT CAACGAACCG
GAACGCGTCG AAGCGAAGTC CCTCCCGCAT CCGGCGCTGG CGATCCTGCC GCTGATTCTC
GTGGGCGTGT CGAACTTCGC GTTCACGAAG CTGATCCCGC AGTGGTACGG CGCCGCGTCG
TACACGGTCG CGCCGGACGT GCTGCCCGGC GTACACGCGC CGGTCACGAC GTCGATCAAG
ACCGTCGTCG CGATCTGGTC GGTCGAGGCC GCGCTGCTGC TCGGCATCGT GCTGGTCATC
CTGACCGCGT TCAAGCGCGT GAGCGGCCGC TTCGCGGACG GCTCGAAGGC CGCCGTCGCC
GGCGCACTGC TCGCTGCGAT GAACACCGCG TCGGAATACG GTTTCGGCGG CGTGATCGCC
GCGCTGCCGG GCTTCCTCGT CGTCAGCGAC GCGCTGAAGA GCATTCCGAA CCCGCTCGTG
AACGCGGCCG TATCGGTCAG CTCGCTCGCC GGCATCACCG GTTCGGCGTC GGGCGGCATG
AGCATCGCGC TCGCCGCGAT GTCGGACCTG TTCATCAAGG GCGCCCAGGC GGCCAACATT
CCGCTGGACG TGCTGCACCG GGTCGTCGCG ATGGCCAGCG GCGGCATGGA CACGCTGCCG
CACAACGGCG CGGTCATCAC GCTGCTCGCG GTCACGGGCC TCACGCACCG CCAGTCGTAT
CGCGACATCT TTGCGGTCAC CATCATCAAG ACGCTCGCGG TGTTCTTCGT GATCGCCGTG
TACTACACGA CGGGCCTCGT GTAA
|
|---|
| Protein sequence | MSFVIVLAAL AFLMFAAYRG YSVILFAPIA ALGAVLLTDP AAVAPVFSGI FMEKMVGFVK
LYFPVFMLGA VFGKVIELSG FSESIVHAAI RYIGRSRANA VIVAVCALLT YGGVSLFVVV
FAVYPFAAEL YRQSNIPKRL MPGAIALGAF SFTMDSLPGT PQIQNIIPTT FFKTTAWAAP
VLGTIGSLFI VVVGLTYLEW RRRSAMAKGE GYGTSLVNEP ERVEAKSLPH PALAILPLIL
VGVSNFAFTK LIPQWYGAAS YTVAPDVLPG VHAPVTTSIK TVVAIWSVEA ALLLGIVLVI
LTAFKRVSGR FADGSKAAVA GALLAAMNTA SEYGFGGVIA ALPGFLVVSD ALKSIPNPLV
NAAVSVSSLA GITGSASGGM SIALAAMSDL FIKGAQAANI PLDVLHRVVA MASGGMDTLP
HNGAVITLLA VTGLTHRQSY RDIFAVTIIK TLAVFFVIAV YYTTGLV
|
|---|
| |