Gene BamMC406_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5396 
Symbol 
ID6180188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2634459 
End bp2636816 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content70% 
IMG OID641685151 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001812056 
Protein GI172064405 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.916817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.647823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCC GCCATCTCGA TGCATTGTTC CAGCCCAGGT CCGTCGCCGT CGTCGGTGCA 
TCGTCGCGCG CCGGCAGTAT CGGTGCGATG GTGTGGGCGC GCGTGCTCGA CGGTGCGTTC
GACGGGCCCG TGTGGCCCGT CAATCCGAAG TACCGCGAGT TGAACGGGCA TGCGGTCGTG
ACCGATGTCG ATCGGCTTCC CGCGCCGCCA TCGGTCGCCG TGATCTGCAC GCCGCCTGCC
ACGTGGGCCG GCATCGTGCG CAAGCTCGGC GAGCTCGGCA CGCGCGTCGC GGTGATCGTC
GGCGAAGCGC GCACCGACGC CGATCGCGCG GCACTCGATC GCACGCTCAA GGCCGCGAAG
CCGTTCGTGC TCCGTATCGT CGGGCCCGGC AGTCTCGGCG TGCTGTCGCC CGCGCGGCAT
GCGCATTTCG GCGCGCCGGC CTATACGGCA CGATCGGGCG GCGTCGCCTG GGTGTCGCAA
TCGAACGCGC TGACGAACGC GGTCCTGGGC TGGGCCGATG CGCGAGGCCT CGGCTTTTCG
CATGTCGTCG CGCTGGGCAG CGAGGCCGAC GTCGATGCGG GCGACGTGCT CGACTACCTC
GCCAGCGATC CCGGCACGCG CGCGATCCTG CTCGAGCTCG ACACCGTATG CGCCGCGCGC
AAGTTCATGT CGGCAGCACG CGCGGCGGCG CGCAACAAGC CGGTCCTCGC GTTGCGCACC
GGGCGCGCCG ATCCCGGCGA TGCGCTTTAC ACGGCGGCGT TCCAGCGTGC GGGGATGGTG
CGCGTCGATG CGCTCGACGA TCTGCTCGAC GAGATCGAGA CGCTCGGCGT CGGTCGCGTC
ACCGCGCGTG GCGCGGCGAC GCTCGTGACG AGCGACGCGG GCGTCGCGAA GCTTGCGGGC
GATGCGGTCG CGGAGGTGCG CGACGTGCTG GCCGACTGGC CGGCAGCGGC GACGTCGGCG
GTAGCGGCCG CATTGCCGCA TCTCGCCGGG CCGGGCAATC CGCTGATGCT CGGCGACGAT
GCGCGTTCCG AGCATTTCGG CGCCGCCGTC AAGGCGCTCG CGCCGTTTCC GCAAACGGGC
GCGCTGTTCG TCGTGCATTC GACGTCCCAC AGCGCGCCGG CCGATGCGGT CGCGCGCACG
CTGATCGAAT CGCGGCAATA CGCATACCGC GGCATCCTCG CGTGCTTCTT CGGTGCAGTT
GACGCGGCGA CGCGCGACGC CCTGCACGCG AACGGGATCC CGGTGTACAC CACGCCGCAG
CGGCTTGCAC GCGCATACGC GCGGCTGGTC GACTACAACC TCGGGCGGCA GTTGCTGATG
CAGACGCCCG AGGGCACGCC GCTGCAGCCG CTCGAGTGCG TCGCGTCCGC ACAGGCCGAG
GCCCGCCGGA TGGTCGAGGC CGGCGAGCAT GAACTGTCCG GCGATGCAGC GCTGCGCTGG
CTCGCTCACT TCGGGATGCA CGGTGAGCCG GCCGACGCGT CGGCGGCCGC CAGGGTCGTC
GACATCACGG TCGACATGTA CGACGATTCG AACTTCGGTC CGGTGTTCCG CTATGCCGTG
CCGCCGGCGG ACGGCGTATC GGCGCCATTC ATCGTGTACG GGCTGCCGCC GCTGAATACG
GTGCTCGCCC GCGCGGTAAT GGAGCGCTCG CCCTACGCGC GCCGGGCGCC CGTCGAACCC
ACGCTCGATG CGCTGACGGC GCTGTCGCAG GTCGTTTGCG ACGTGCGCGA GGTCGTCGCG
ATGTCGATCA CGCTGCGCGT GCTGTCCGAC CGCGCATACA TCATCGCGCC GCGCCTCACG
CTGGCGGCGG GGCGCGGCCG GCTCGCGATC ATGCCGTATC CGCGTCATCT CGAGCAGACG
CTCGAATGGC GCGGCGAGAC CGTGACGATC CGTCCGATCC GTCCGGAAGA CGAGGAGGCG
CACAACGAAT TGCTCGGCGC GATGACACCG GACGATCTGC GAATGCGGTT CTTCGGTGCG
GTGCGCAGCT TCGATCATTC GCAAGTCGCG CGCATGACGC AGATCGACTA CGACCGTGAG
ATGGCTTTCA TCGTGTCGTT TACCGACGTG TCGGGTCGGT CGCACACGCT CGCGGTGGCG
CGCGCGGTCG CCGATCCCGA CAACGAGACG GCCGAGTTCG CGATTGCCGT GCGGCCCGAT
CAGAAGGGTA AGGGCCTGGG GCGCCTGATG ATGACCCGCA TCATCGACTA CGCGCGGTCG
CGCGGCACCG GATGGATGAT CGGCGAGGCG CTGCGCGAGA ACACCGCGAT GATTTCGCTG
GCGAAGTCAT GCGGTTTCGC GGTGTCGACG ACGGAGGAGC CCGGCGTGGT CGGGTTCAGG
ATGAAGCTGC AATCGTAG
 
Protein sequence
MTVRHLDALF QPRSVAVVGA SSRAGSIGAM VWARVLDGAF DGPVWPVNPK YRELNGHAVV 
TDVDRLPAPP SVAVICTPPA TWAGIVRKLG ELGTRVAVIV GEARTDADRA ALDRTLKAAK
PFVLRIVGPG SLGVLSPARH AHFGAPAYTA RSGGVAWVSQ SNALTNAVLG WADARGLGFS
HVVALGSEAD VDAGDVLDYL ASDPGTRAIL LELDTVCAAR KFMSAARAAA RNKPVLALRT
GRADPGDALY TAAFQRAGMV RVDALDDLLD EIETLGVGRV TARGAATLVT SDAGVAKLAG
DAVAEVRDVL ADWPAAATSA VAAALPHLAG PGNPLMLGDD ARSEHFGAAV KALAPFPQTG
ALFVVHSTSH SAPADAVART LIESRQYAYR GILACFFGAV DAATRDALHA NGIPVYTTPQ
RLARAYARLV DYNLGRQLLM QTPEGTPLQP LECVASAQAE ARRMVEAGEH ELSGDAALRW
LAHFGMHGEP ADASAAARVV DITVDMYDDS NFGPVFRYAV PPADGVSAPF IVYGLPPLNT
VLARAVMERS PYARRAPVEP TLDALTALSQ VVCDVREVVA MSITLRVLSD RAYIIAPRLT
LAAGRGRLAI MPYPRHLEQT LEWRGETVTI RPIRPEDEEA HNELLGAMTP DDLRMRFFGA
VRSFDHSQVA RMTQIDYDRE MAFIVSFTDV SGRSHTLAVA RAVADPDNET AEFAIAVRPD
QKGKGLGRLM MTRIIDYARS RGTGWMIGEA LRENTAMISL AKSCGFAVST TEEPGVVGFR
MKLQS