| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5387 |
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| Symbol | |
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| ID | 6181216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2622320 |
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| End bp | 2624917 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641685142 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001812047 |
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| Protein GI | 172064396 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATA CTGCCTACCG CAAACCCCTG CCCGGCACGT CGCTGGACTA TTTCGACGCG
CGTGCCGCGG TCGAAGCGAT CGCGCCCGGC GCCTACGACA CACTGCCGTA TACGTCGCGC
GTGCTCGCCG AAAACCTCGT GCGCCGCTGC GATCCGGCGA TCCTTGCCGA TTCGCTCAAG
CAGATCATCG AGCGCAAGCG CGACCGCGAT TTCCCGTGGT TCCCGGCGCG CGTGGTGTGC
CACGACATCC TCGGGCAGAC GGCGCTCGTC GATCTCGCCG GCCTGCGCGA CGCGATCGCC
GACGGCGGTG GCGACCCCGC GAAGGTGAAC CCGGTCGTGC CCGTGCAGTT GATCGTCGAC
CACTCGCTCG CCGTCGAGTG CGGCGGCTTC GATCCGGACG CGTTCGCGAA GAACCGCGCG
ATCGAGGATC GCCGCAACGA GGATCGCTTC CACTTCATCG AGTGGACGAA GAAGGCGTTC
GAGAACGTCG ACGTGATCCC GCCGGGCAAC GGCATCATGC ACCAGATCAA CCTCGAGAAA
ATGTCGCCGG TGATCCAGGC GCAGGACGGC GTAGCGTTCC CGGACACCTG CGTCGGCACC
GACAGCCACA CGCCGCACGT CGATGCGCTC GGCGTGATCG CGATCGGCGT CGGCGGCCTG
GAGGCGGAGA ACGTGATGCT CGGCCGCGCA TCGTGGATGC GCCTGCCCGA CATCGTCGGC
GTCGAGCTGA CCGGCAAGCG CCAGCCCGGC ATCACCGCGA CCGACGTCGT GCTCGCGCTG
ACCGAGTTCC TGCGCAAGGA AAAGGTGGTC GGCGCGTATC TGGAATTCCG TGGCGAAGGC
GCCGCGAGCC TCACGCTCGG CGACCGCGCG ACGATCTCGA ACATGGCGCC CGAATATGGC
GCGACGGCCG CGATGTTCTT CATCGACGGC CAGACGACCG ACTACCTGCG CCTCACCGGC
CGCAGCGACG AGCAGGTGAA GCTGGTCGAG ACCTACGCGA AGGCGGCGGG CCTGTGGGCC
GATACGCTGG GCAACGTGCA ATACGAGCGC ACGCTGACGT TCGACCTGTC GAGCGTGGTG
CGCAACATGG CCGGCCCGTC GAACCCGCAC AAGCGGCTGC CGACGTCCGA TCTCGCCGCA
CGCGGGATCG CCGGCCAGTG GGAAGAAAAG CCGGGCGAGA TGCCCGACGG CGCGGTGATC
ATCGCCGCGA TCACGAGTTG CACGAACACC AGCAACCCGC GCAACGTGAT CGCCGCGGCG
CTGCTCGCGC GCAACGCGAA CGCGAAGGGC CTCACGCGCA AGCCGTGGGT GAAGAGCTCG
CTCGCGCCGG GCTCGAAGGC GGTCGAGCTG TATCTGGAAG AAGCGAACCT GCTGCCGGAG
CTGGAGAAGC TCGGCTTCGG CATCGTCGCG TTCGCGTGCA CGACCTGCAA CGGGATGTCG
GGCGCGCTCG ATCCGAAGAT CCAGCAGGAG ATCGTCGATC GCGACCTGTA CGCGACCGCC
GTGCTGTCCG GCAACCGCAA CTTCGACGGC CGCATCCACC CGTACGCGAA GCAGGCGTTT
CTCGCGTCGC CGCCGCTCGT CGTCGCGTAT GCGATCGCCG GCACGATCCG CTTCGACATC
GAGAAGGACG TGCTGGGCCA CGACCGCGAC GGCAAGCCCG TCACGCTGAA GGACATCTGG
CCGACCGACG AGGAGATCGA CGCGATCGTC GCGTCGAGCG TGAAACCCGA GCAGTTCCGC
AAGGTCTACG AACCGATGTT CGCGCGCACG GCCGATGCGG GCGAGCGTGC GGCGCCGCTG
TACGACTGGC GCGCGCAGAG CACGTATATC CGTCGCCCGC CTTACTGGGA AGGCGCGTTG
GCCGGCGAGC GCACGCTCAA GGGCATGCGC CCGCTCGCGG TGCTCGGCGA CAACATCACG
ACCGACCACC TGTCGCCGTC CAACGCGATC CTGCTGGACA GCGCGGCTGG CGAATACCTC
GCGAAGATGG GCCTGCCGGA AGAAGACTTC AACTCGTACG CGACGCACCG GGGAGACCAC
CTGACCGCGC AGCGCGCGAC CTTCGCGAAC CCGACGCTGA TCAACGAGAT GGCGGTCGTC
GACGGCGCGG TGAAGAAGGG CTCGCTCGCG CGTGTCGAGC CGGAAGGCAA GGTCATGCGC
ATGTGGGAGG CGATCGAGAC GTACATGAAC CGCAAGCAGC CGCTGATCGT GATCGCCGGC
GCCGACTACG GCCAGGGCTC GTCGCGCGAC TGGGCCGCGA AGGGCGTGCG GCTCGCGGGC
GTCGAGGTGA TCGTCGCCGA AGGGTTCGAG CGGATCCACC GCACCAACCT GATTGGGATG
GGCGTGCTGC CGCTCGAGTT CAAGCCGGGC ACGAACCGCA CCACGCTCGG CATCGACGGC
ACCGAGACCT TCGACGTGGT CGGCAAGCGC ACGCCGCGCG CCGATCTCAC GCTCGTGATT
CACCGCAAGA GCGGCGAGCG TGTCGAGGTG CCGGTGACGT GCCGGCTCGA TACGGCCGAG
GAAGTGTCGA TCTACGACGC GGGCGGCGTG CTGCAGCGCT TCGCGCAGGA CTTCCTCGAA
TCGTCGCAGG CGGCTTGA
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| Protein sequence | MMNTAYRKPL PGTSLDYFDA RAAVEAIAPG AYDTLPYTSR VLAENLVRRC DPAILADSLK
QIIERKRDRD FPWFPARVVC HDILGQTALV DLAGLRDAIA DGGGDPAKVN PVVPVQLIVD
HSLAVECGGF DPDAFAKNRA IEDRRNEDRF HFIEWTKKAF ENVDVIPPGN GIMHQINLEK
MSPVIQAQDG VAFPDTCVGT DSHTPHVDAL GVIAIGVGGL EAENVMLGRA SWMRLPDIVG
VELTGKRQPG ITATDVVLAL TEFLRKEKVV GAYLEFRGEG AASLTLGDRA TISNMAPEYG
ATAAMFFIDG QTTDYLRLTG RSDEQVKLVE TYAKAAGLWA DTLGNVQYER TLTFDLSSVV
RNMAGPSNPH KRLPTSDLAA RGIAGQWEEK PGEMPDGAVI IAAITSCTNT SNPRNVIAAA
LLARNANAKG LTRKPWVKSS LAPGSKAVEL YLEEANLLPE LEKLGFGIVA FACTTCNGMS
GALDPKIQQE IVDRDLYATA VLSGNRNFDG RIHPYAKQAF LASPPLVVAY AIAGTIRFDI
EKDVLGHDRD GKPVTLKDIW PTDEEIDAIV ASSVKPEQFR KVYEPMFART ADAGERAAPL
YDWRAQSTYI RRPPYWEGAL AGERTLKGMR PLAVLGDNIT TDHLSPSNAI LLDSAAGEYL
AKMGLPEEDF NSYATHRGDH LTAQRATFAN PTLINEMAVV DGAVKKGSLA RVEPEGKVMR
MWEAIETYMN RKQPLIVIAG ADYGQGSSRD WAAKGVRLAG VEVIVAEGFE RIHRTNLIGM
GVLPLEFKPG TNRTTLGIDG TETFDVVGKR TPRADLTLVI HRKSGERVEV PVTCRLDTAE
EVSIYDAGGV LQRFAQDFLE SSQAA
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