| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5373 |
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| Symbol | |
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| ID | 6181017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2607723 |
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| End bp | 2610536 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641685128 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001812033 |
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| Protein GI | 172064382 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.698068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAT CACTCGCGTC CGCGGGCTTG CAAACGATCG AACTGACTAT CGACGGCATG
CATTGCGGCG GCTGCACGGG CCGCGTGGAG CGGGCACTCG CCGCCGTGCC GGGCGTCGTC
GAGGCCGCGG TCGATCTCGA CGCGCAGGCG GCGACGGTCA CCGCGCAGGA TACGGTCGAG
CCCGCGCAGC TCGTCGATGC GGTCGGCGCG GCGGGCTATC GCGCGACCGT GCGCGAAGCG
GCGTTCGAAG CCGTCGCTGC CGCGCAGGCG GAGCCCGCGC CCCGTGTCGA AGCGCTGCAT
GCCGCGCCCG CGGCACCGCC CGCGCCCGCG GCCACGATCG AACTCGAGAT CGACGGCATG
ACCTGCGCGT CGTGCGTGTC ACGCGTCGAA AAGGCGCTGG CGAAGGTGCC GGGCGTCACG
CGTGCGTCGG TCAACCTCGC GACCGAACGC GCGACCATCG ACGCGGCCCC GGACGTTTCC
GCGTCGCGAC TGGCCGAAGC CGTGCAGCAA GCCGGCTACG GCGCGACAGC GGTCGCAGCG
ACGCCGCCGC CGGCCGCTTC CCGCGATCTC GAATTCGACA TCGGCGGCAT GACGTGCGCA
TCCTGCGCCG GCCGCGTCGA AAAAGCACTG GCCGCGGTGC CGGGCGTCGC GCGCGCATCG
GTCAATCTCG CGACCGAACG CGCATCGGTG CATGGCGCCG GCGCGCTCGA CGCCGCCGCG
CTGATCGCGG CGGTCACGAC GGCCGGCTAC CGCGCATCGC TCGCCGCCGC GCCGGACGCC
GGCACCGGCG CCGCAGCTGA AGTTCCCGCC GGCGACGCGG CGCAAGCCCC CGAGGCCCGC
AAGCGCCGCG AAGCGATCCG CGAACGCAAT CTGGTGATCG GCTCGGCCGT GCTGAGCGCA
CCGCTCATCG TGTCGATGCT CGTCGCACCG TTCGGCATCG ACGCGATGCT GCCCGGCTGG
CTGCAACTCG TGCTCGCGTC GATCGTCCAG TTCGGCTTCG GCGCGCGCTT CTACCGCGCC
GCCTGGCACG CGGTGAAGGC GCGCACCGGC AACATGGACC TGCTCGTCGC GCTCGGCACA
TCGGCCGCGT TCGGCCTGAG CCTGTGGATG CTGGTGCGCG ACCCCGTCGA CCCGGGCCAC
CTGTATTTCG AGGCATCGGC CGTCATTGTC ACGCTGGTGC GCTTCGGCAA ATGGCTCGAA
GCCCGCGCGA AACGCCAGAC GACCGAGGCG ATCCGCGCGC TGAACGCGCT GCGTCCCGAC
CGCGCGCGCG TCGTCGAGCA CGGCGTCGAA CGCGACGTGC CGCTCGCGCA GGTGCGCGTC
GGCACGACCG TCAGCATTCG TCCCGGCGAG CGCGTGCCCG TCGACGGGCG GATCGTGTCG
GGCCGCTCGC ACGTCGACGA ATCGCTGATC ACCGGAGAAA GCCTGCCGGT GCCGAAGGAC
GACGGCGATC CGGTCACGGC CGGCTCGATC AACGGTGAAG GCGCGCTCGT CGTCGCAACC
ACCGCGATCG GCGCGGAGAC GACGCTCGCG CGCATCATCC GCCTCGTCGA ATCCGCGCAG
GCGGAAAAGG CGCCGATCCA GCGGCTCGTC GATCGCGTGA GCGAAGTGTT CGTGCCGGCA
ATCCTCGGCA TCGCCGTGCT GACGCTGATC GGCTGGCTGA TCGCCGGCGC CGGCACCGAA
ACGGCGATTC TCAACGCGGT CGCGGTGCTC GTCATCGCAT GCCCGTGCGC GCTCGGTCTC
GCGACGCCCG CGGCGATCAT GGCCGGCACC GGCGTCGCGG CGCGCCACGG CGTGCTGATC
AAGGACGCGC AGGCGCTCGA ACTCGCGCAG CGCACGACCG TGATCGCGTT CGACAAGACC
GGCACGCTGA CCGAAGGCAA GCCGTCCGTG ACGGCGTTCG ACGCCGTCGG CGTCCCACGT
GAGCAAGCGC TCGCTCTCGC GGCCGCGGTC CAGCGGCAAA GCGACCATCC GCTCGCGCGC
GCCGTGGTCG CCGCGCACGA AGCGGACGTC GTGGCCCGCG GCGTCGCCGC AGGCTCGACC
GATATCGTCG CGGCCGATGC GCGCGCGGTG GCCGGACGCG GCGTTCAAGC GCACGTCGAC
GGGCAGCTTC TCGCGCTCGG CAGCACCCGC TGGCGCGATG AACTCGGCAT CGACGTGCCG
CCGGAACTCG ACGCGCGTGC CGCGGAGCTT GAACACGCGG GCAACACGAT TTCGTGGCTG
ATGCGCGCCG ATGCGCCGCG CGCGTTGCTC GCGCTGATCG CGTTCGGCGA CACCGTGAAG
CCCGGCGCGC GCGACGCGAT CGCCGCACTG TCGGCGCGCG GCGTCGCGAG CGTGCTCGTG
ACGGGCGACA ACCGCGGCAG CGCGGCGGCC GTCGCGGCAG CGCTCGGGAT CGGCGAAGTG
CATGCGCAGG TGCTACCCGA CGACAAGGCG CGCGTGGTGG CCGAACTGAA GCGCACCCAC
GGCGGCGTCG TCGCAATGGT CGGCGACGGG ATCAACGACG CGCCCGCGCT CGCCGCGGCC
GACGTCGGCA TCGCGATGGC GACCGGCACC GACGTCGCGA TGCATACGGC CGGCATCACG
CTGATGCGCG GTGATCCGGC GCTCGTCGCC GATGCGATCG ACATCTCGAA GCGGACGTAC
CGGAAGATCC AGCAGAACCT GTTCTGGGCG TTCGTCTACA ACCTGATCGG CGTGCCGCTC
GCGGCGCTCG GCTGGCTGAA CCCGGTGATC GCGGGGGCGG CGATGGCGTT CTCCAGCGTC
AGCGTCGTGA CGAACGCGTT GCTGCTGCGG AGGTGGAAAG GACGGGCAAG GTGA
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| Protein sequence | MTESLASAGL QTIELTIDGM HCGGCTGRVE RALAAVPGVV EAAVDLDAQA ATVTAQDTVE
PAQLVDAVGA AGYRATVREA AFEAVAAAQA EPAPRVEALH AAPAAPPAPA ATIELEIDGM
TCASCVSRVE KALAKVPGVT RASVNLATER ATIDAAPDVS ASRLAEAVQQ AGYGATAVAA
TPPPAASRDL EFDIGGMTCA SCAGRVEKAL AAVPGVARAS VNLATERASV HGAGALDAAA
LIAAVTTAGY RASLAAAPDA GTGAAAEVPA GDAAQAPEAR KRREAIRERN LVIGSAVLSA
PLIVSMLVAP FGIDAMLPGW LQLVLASIVQ FGFGARFYRA AWHAVKARTG NMDLLVALGT
SAAFGLSLWM LVRDPVDPGH LYFEASAVIV TLVRFGKWLE ARAKRQTTEA IRALNALRPD
RARVVEHGVE RDVPLAQVRV GTTVSIRPGE RVPVDGRIVS GRSHVDESLI TGESLPVPKD
DGDPVTAGSI NGEGALVVAT TAIGAETTLA RIIRLVESAQ AEKAPIQRLV DRVSEVFVPA
ILGIAVLTLI GWLIAGAGTE TAILNAVAVL VIACPCALGL ATPAAIMAGT GVAARHGVLI
KDAQALELAQ RTTVIAFDKT GTLTEGKPSV TAFDAVGVPR EQALALAAAV QRQSDHPLAR
AVVAAHEADV VARGVAAGST DIVAADARAV AGRGVQAHVD GQLLALGSTR WRDELGIDVP
PELDARAAEL EHAGNTISWL MRADAPRALL ALIAFGDTVK PGARDAIAAL SARGVASVLV
TGDNRGSAAA VAAALGIGEV HAQVLPDDKA RVVAELKRTH GGVVAMVGDG INDAPALAAA
DVGIAMATGT DVAMHTAGIT LMRGDPALVA DAIDISKRTY RKIQQNLFWA FVYNLIGVPL
AALGWLNPVI AGAAMAFSSV SVVTNALLLR RWKGRAR
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