| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5371 |
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| Symbol | |
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| ID | 6180505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2601925 |
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| End bp | 2605740 |
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| Gene Length | 3816 bp |
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| Protein Length | 1271 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641685126 |
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| Product | hypothetical protein |
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| Protein accession | YP_001812031 |
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| Protein GI | 172064380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.955656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCG CAGAGAAAGA AACCGTACCC TCGACCCTTC AAACCCTCGG CGGCGTTGCA
CGCTCGCGCC GGGCCCGGCG TATCGGCCTT GGCGTGCTGA TCTTCATCGT TTTGTTCGGA
TTGCTCGGAT TCTTCGCGGC GCCGCCGCTG ATCCGCCACA TCGCCGAACA GCAACTGAGC
CAGCAACTCG ACCGGCCGTC CACGATCCAG CGCATCGCGC TGAACCCGTA TACGCTGAAT
CTCGAAGCCG ACGGCGTGCA CGTCGGCGAG CGCGGCGGCC AGGGCGGCTT CATCGACATC
GACAAGCTCG TCGTGCGGCC GTCGTGGTCG TCGCTGTTTC GCGGCGCGCC GATCGTCAAC
GAAGTGCGCG TCGACTCGCC GCGCTTCCAT ATCGTCCGCT ACGACGCGCA GCGCTTCAAC
TTCACCGACC TGATCGAGAA GTTCTCGAAG CCGTCCCCCA AGCCCGAAAG CAAGCCGACG
CAGTTCTCGG TGTCGAACAT CCAGGTCAAC GACGGCCGGA TCGACTTCGA CGATCGCCTG
CTGAACGAAA AGCACGTGGT CGACAACTGG ACGCTCGGCA TTCCGTTCAT CGCGACGCTG
GCGTCGAAGA CCGACATCTT CGTGCAGCCG AAGCTGCGCG CGCGGTTCGA CGGCAGCCCG
ATCGCGATCG ACGGCAAGAC GAAGCCGTTC GCGCAGTCGC GCGAGTCGGA AGTCGCGCTG
AAGTTCGACC GGCTCGACGT GCCGAAACTG ATTTCGTACG CGCCGGCGAA GCTGCCGGTG
ATCGTCACGA GCGGCCTGTT GAGCAGCGAT CTCACGCTGA ACTTCGTGAT GAGCGGCGAC
ACGCCCACGC TGCGCGTGGC GGGCACCATC GACCTGAACG ACGCGAAGGT CACCGGCCGC
GCGTCCGAGC CGCTGTTCGC CGCGCGCGGC GTGCACGTGG CGGCCGCCCG CCTCGAGCCG
CTGCGCAACG TGCTGCATTT CGACGAGATC CGGTTCGACC AGCCGGTCGT CGACCTGGCG
CGCGACAAGC ACGGCGTGCT GAACGTCGAG AAGCTCGCCG GCCAGCCGGC CGCCGCGCCG
AAGGCTGCCG CGGGCCAGCC GGCCGCGTCG GGCGCCGCTG CATCGACGGC CGGCGCCACC
GCCGCTGCGA GCGGCGCGAG CAGTGCGAAG GCCGAAACCG CCGCGAAGGC AGCACCGCCG
CTCGACCTGA CGATCCGTCA TTTCGCGATC GACGGCGGCA CGATCAACGT CGACGACCGC
GTGCCCGCGA CGCCGACCGC GATGTCGCTG ATCAAGCTCG CCGCGACGCT CGACGGCTTC
ACGCTGCAGG GCAAGACGCC GGCGAAGTAC ACGCTGTCGA CGTCGTTGTC GCGCGGCGGC
GACGTGAAGG CCGAGGGCGC GTTCAGCGTC GCGGCGAAGC AGGCCGACAC GAAGCTGACG
GTGGACACGC TCGCGCTGCC CGCGCTGCAG CCGTATCTCG GCGAGGCGAC CCGTGCGCGC
GTGCTCGACG GCACGCTCGG CGCGACCGTC AACGCAAAGG CCGACTGGGG CAAGACGCCG
CTCGACGCGC AGATCGCCGA CAGCACGGTG AGCCTCAAGT CGCTGAAGGT AGCGACGCCG
GACGCGAAGG CGCCCGCGAT CGTGCTGCCC GATGCGAGCG CGAAGATCGC GAAGGTCGAT
GTCGCCGCGC GCACCGCGGA AATCGCGAGC GTCGACGCGA CCGGGCTCGC GCTCGACGTC
AAACGCCTGA AGGACGGCAA GATCGACCTC GCGGCGCTGG CCGAACCCGC GCAGGCGGCG
GTGCCCCAGC GCACGGTCGC GCGCAAGGCC GAGGCGGCCG CGCCGTCGTG GCATTACCGG
ATCGACGCGC TGAACGTGAA GGACTCTGCC GCGAACTTCA CGGACCTGTC GACGCCGCGC
CCGGTGAAGC TCGCGATCAA GCCGCTCGAC CTGTCGGTGC AGAAGATCAG CGACGACATG
ACGAAGCCGC TCCCGGTGCA GCTGAAGGCG ACGCTGAACC GCAAGGGCGC GCTGAGCGTG
TCGGGCGACG TGACCGCGCA GCCGCTGAAG CTCGGCCTGA AGATCAACGG CAACCGCCTC
GACGCGGCCG CGTTCGAGCC GTACTTCGGC AGCGCGCTGA ACGCGACCAT CGCGAGCGCG
CTGCTCAACG CGCAAGGCAA CCTGACGTTC GCGCAGGTGA AGGACGCGCC GCGCGCGACT
TATCGCGGCG ATGCCGCGCT GGTCGACGTG CGGATGCTCG ACAAGGCGAC GTCCGATCCG
TTCGCGGGCT GGCGCTCGCT CGCGCTGTCG AACCTGAAGG TAAACCACGA CGAGAAGGGC
ACCGACGTCG ACGCCGCGCG CGTGACGTTC ACGAACTTCT ACGGTCGCGT GCTGCTCGAT
GCGCAGGGGC GGCTGAATTT GAAGGACGTC GTCGCGAAGG AGACGGGCCC CGCGCAGTCG
CTCACGCGCG ATGCGAGCAA GGGCGAGCCC GTGCCGCTGT CGCCGGGCGC GACGTCGCCG
GCCGCCGCAT CTGCCGCCTC GGCCGCGGTC GCGCAGCAGG CGTCCGCGCC GGCCGCCGCT
TCGGCGACGG TCGTCGTGAA GGCCGCGCCG CCGCCGCAGA ACCCGGTGCG GATGCATTTC
GGCGAGCTGC TGCTGCAGAA CGGCCGCGTC ACGTACACGG ACAACTTCAT CAAGCCGAAC
TACACGGCGC ACCTCGTCGC GATCAAGGGC ACGGTCGGCG CGTTCGGCAC GGATTCGACG
ACGTCCGCGC CGGTCGACGT CGCCGCGAAC CTCGAGGGCA ACGGGCCGAT CTCGATCAAG
GGTTCGGTGA ATCCGCTGAT CGAGAAGCCG GCGCTGGACC TGACGGCGAC CGCGCACGAC
ATCGAGCTGA CCAACCTGAC GCCGTATTCC GCGAAGTACG CGGGTTATCC GATCACGAAG
GGCAAGCTCA ACGTCGATCT GCACTACCAG CTCGCGAACG ATCAACTGCA GGCGAACAAC
CACATCTTCA TCGACCAGCT CACGTTCGGC GACCACGTCG ACAACGACAC GGCGACGAAG
CTGCCGGTGA AGCTCGCGAT TTCGCTCCTG AAGAACACGC GCGGCCAGAT CGACGTGAAC
CTGCCGGTGT CGGGTTCGCT GTCGAATCCG GAATTCAGCG TCGGCGGGCT GATCTGGCGC
GCGGTGCTGA ACCTGATCGC GAAGGCCGTC ACGTCGCCGT TCTCGCTGCT CGCGAATGCA
TTCGGCGGCA GCGGCGGCGA GGATCTCGGC TACGTCGAGT TCGCGCCGGG CTCGTACCAG
CTGACCGATG CGCAGCAGAA GAAGCTCGAC ACTGTCGTGA AGATGCTGAC CGAGAAGCCG
TCGATCCGCC TCGACCTGAT CGGCCGCGTC GATCCGGCGA AGGACACGCC GGGATTGCGC
GATGCGTACG TCGACCGGCT GGTGCGCCAG CAGAAGCTGA AGGATGTGAT CGGCCAGGGC
GAGAGCGTCG ATCCGATGTC GGTGAAGGTC GACCAGGCCG AGTACGAGAA GTACCTGACG
CGTGCGTACA AGGCCGCCGA CTTCAAGAAG CCGCGCAACC TGGTCGGCCT GCAGAAGACG
CTGCCCGAGG CGGACATGAA GCAGGCGCTG GCCGATCATG CGCCGGCCGA CGACAACGCG
CTGCGTGCGC TCGCGCAGCA GCGCGCGCAG GCCGTGCGCC AGTATCTCGA CGGCAAGATC
GATTCGAGCC GGATGTTCGT CGTGGCGTCG AAGCTCGATG CGAAGGGCAT CGAGGACAAG
GGCGCGACGA CGCGCGTCGA CTTCGGCCTG CAGTAA
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| Protein sequence | MASAEKETVP STLQTLGGVA RSRRARRIGL GVLIFIVLFG LLGFFAAPPL IRHIAEQQLS
QQLDRPSTIQ RIALNPYTLN LEADGVHVGE RGGQGGFIDI DKLVVRPSWS SLFRGAPIVN
EVRVDSPRFH IVRYDAQRFN FTDLIEKFSK PSPKPESKPT QFSVSNIQVN DGRIDFDDRL
LNEKHVVDNW TLGIPFIATL ASKTDIFVQP KLRARFDGSP IAIDGKTKPF AQSRESEVAL
KFDRLDVPKL ISYAPAKLPV IVTSGLLSSD LTLNFVMSGD TPTLRVAGTI DLNDAKVTGR
ASEPLFAARG VHVAAARLEP LRNVLHFDEI RFDQPVVDLA RDKHGVLNVE KLAGQPAAAP
KAAAGQPAAS GAAASTAGAT AAASGASSAK AETAAKAAPP LDLTIRHFAI DGGTINVDDR
VPATPTAMSL IKLAATLDGF TLQGKTPAKY TLSTSLSRGG DVKAEGAFSV AAKQADTKLT
VDTLALPALQ PYLGEATRAR VLDGTLGATV NAKADWGKTP LDAQIADSTV SLKSLKVATP
DAKAPAIVLP DASAKIAKVD VAARTAEIAS VDATGLALDV KRLKDGKIDL AALAEPAQAA
VPQRTVARKA EAAAPSWHYR IDALNVKDSA ANFTDLSTPR PVKLAIKPLD LSVQKISDDM
TKPLPVQLKA TLNRKGALSV SGDVTAQPLK LGLKINGNRL DAAAFEPYFG SALNATIASA
LLNAQGNLTF AQVKDAPRAT YRGDAALVDV RMLDKATSDP FAGWRSLALS NLKVNHDEKG
TDVDAARVTF TNFYGRVLLD AQGRLNLKDV VAKETGPAQS LTRDASKGEP VPLSPGATSP
AAASAASAAV AQQASAPAAA SATVVVKAAP PPQNPVRMHF GELLLQNGRV TYTDNFIKPN
YTAHLVAIKG TVGAFGTDST TSAPVDVAAN LEGNGPISIK GSVNPLIEKP ALDLTATAHD
IELTNLTPYS AKYAGYPITK GKLNVDLHYQ LANDQLQANN HIFIDQLTFG DHVDNDTATK
LPVKLAISLL KNTRGQIDVN LPVSGSLSNP EFSVGGLIWR AVLNLIAKAV TSPFSLLANA
FGGSGGEDLG YVEFAPGSYQ LTDAQQKKLD TVVKMLTEKP SIRLDLIGRV DPAKDTPGLR
DAYVDRLVRQ QKLKDVIGQG ESVDPMSVKV DQAEYEKYLT RAYKAADFKK PRNLVGLQKT
LPEADMKQAL ADHAPADDNA LRALAQQRAQ AVRQYLDGKI DSSRMFVVAS KLDAKGIEDK
GATTRVDFGL Q
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