Gene BamMC406_5364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5364 
Symbol 
ID6181172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2595055 
End bp2596068 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID641685119 
Productthreonine aldolase 
Protein accessionYP_001812024 
Protein GI172064373 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT TACGCAGCGA TACCGTGACA CGTCCGAGCC AGGCGATGCT GGCCGCGATG 
ACTGCCGCCG AAGTGGGCGA CGACGTATGG GGCGACGACC CGACCGTGCT GCGCCTGCAG
GCCGTCACGG CCGAGCGGGC CGGCAAGGAA GCCGGCCTGT TCTTCCCGAG CGGCACGCAG
AGCAACCTTG CCGCGCTGAT GGCCCATTGC GAACGCGGCG ACGAATACAT CGTCGGCCAG
CTCGCGCACA CCTACAAGTA CGAAGGCGGC GGCGCGGCCG TGCTCGGCAG CATCCAGCCG
CAGCCGATCG AGAACGCACC GGACGGCACG CTGCCGCTCG CGAAGATCGC CGCGGCGATC
AAGCCGCTCG ACAATCACTT CGCCCGCACG CGCCTGCTCG CGCTCGAAAA CACGATCGGC
GGCCTCGTGT TGCCGGAAGG CTATGTCCAG GAAGCCGTCG CGTTCGCGCG CAGCCGCGGG
CTGGCCGCGC ACCTCGACGG TGCGCGCGTG TGCAATGCCG CTGTCGCATC GGGTCGTCCG
ATCGCCGAAC TGTGCGCACC GTTCGACACC GTGTCGATCT GCTTCTCGAA AGGACTCGGC
GCGCCGGTCG GTTCGGTGCT GGTCGGCAGT CGCACGCTGA TCGAGCGCGC GCAGCGCTGG
CGCAAGGTGC TCGGTGGCGG GATGCGGCAG TCGGGCATCC TCGCGGCGGC CTGCCTGTAT
GCGCTCGAGC ACAACGTCGA ACGGCTGGCC GACGATCACG CGAACGCCGC GCATCTCGCG
GCAGGGCTCG CGCGCATCGA GCAAGTGAAG GTGCTGTCGC ACGCGACGAA CATGGTGTTC
GCGCAATTTC CGGAAGCCGA CTGCGCGCCG CTCGAGGCGT GGCTCAAGGC GCGCGGGATT
CTCACGCAGA TGCTGTACGC GTCGCGCTTC GTCACGCACT GCGACGTGTC GCGCGCGGAC
ATCGATACCT TCATCGACGC GGTCGGCGCG TATTTCGCGC AGCGTCGTGC GTGA
 
Protein sequence
MIDLRSDTVT RPSQAMLAAM TAAEVGDDVW GDDPTVLRLQ AVTAERAGKE AGLFFPSGTQ 
SNLAALMAHC ERGDEYIVGQ LAHTYKYEGG GAAVLGSIQP QPIENAPDGT LPLAKIAAAI
KPLDNHFART RLLALENTIG GLVLPEGYVQ EAVAFARSRG LAAHLDGARV CNAAVASGRP
IAELCAPFDT VSICFSKGLG APVGSVLVGS RTLIERAQRW RKVLGGGMRQ SGILAAACLY
ALEHNVERLA DDHANAAHLA AGLARIEQVK VLSHATNMVF AQFPEADCAP LEAWLKARGI
LTQMLYASRF VTHCDVSRAD IDTFIDAVGA YFAQRRA