| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5359 |
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| Symbol | |
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| ID | 6180232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2582257 |
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| End bp | 2584293 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641685114 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001812019 |
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| Protein GI | 172064368 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.627453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAGGC AAACGATTCG GCGTACGTTG GCGCTCACTG GAGCAGGGCT CTCTTGCTCC
GTTCTCGCCG CGGGAATCGT TCCGGACGGA GGTACGCCGA CGGTAGTGGG GATCGGCGTT
GGCGGACGTC AAACCGTGAA CATTGCCCCC GCCATCGGCG GCGTCTCGAA CAACACCTAC
TCGTCCTTCA ACGTCTCGAA AGCCGGTGCC GATCTCAACA ACATCGGCAT CAACGCACGC
ACGATTGTCA ATCAGGTCAC GAGCACGAAC CCGTCGCTGA TCCAGGGCAA CATCAATGTC
CTCGGCCCGC GCGCGAACGT GATATTGGCA AATCCGAACG GCGTCACGAT CGACGGCGGC
AGCTTCACGA ACACAGGCCA CGTTGTGCTG TCGACAGGGC AGGTGAGCTT CAGTGATCTC
ACACTCGCAC CCGGCATCGT ACAGCGCAAC GTCGTGCTCA CGACCGATCG CGGCGCGATA
ACGATCGGTC CTGGTGGATT GTCCGGCACC CTAGTCAACC TCGACCTGAT CGCGAAGCAA
CTGAGCATCA ACGGCCCCGT CACGAACGCC TTCACCAGTT CGACGAGCGG CATTCGGGCG
ATCGCTGGCG ACAGCAAGAC GACCTATGAC ACCAGCTTCT CCCCATCCGA CAACGGTCAC
GACTGGCTGA TCGGCACGTC CTCTCCGGGC ACAAAAAGCA ATGCCGTGGC CGTCGACATC
ACCGCAGCCG GTGGCCTGAC GGCCGGTCGC GTGCAGCTGA TCGTCACCGA CCAAGGCGCG
GGTGTACGCA GCCTCGGCAA GATCTACGCG AACGCCGGCG ACGTTGTAGT CGCGGCGAAC
GGCGACATCA CGGTCGCGGA TGGTTCCCTG AAGGCGGAGC GCGACATCGT GCTCACGACG
CCGGGAGCCG TGTCGTTGAC GGGCGCCCAG GTCACTGCGG CAAACAATGC CACCATTCAG
GCCGGCAACA TTGCGCTGTC TGACGACACC ATCGGTCAAA CCACCCTGAC CGCCGGCAAT
ACGGTCAGCT TGACGAGCAG CGGCGCGATC ACCAACACGG GCAGCCTGAT CCAGGCGGGC
ACGACGGCGA GCGACGGCAC CACGACCGGC GGCGACGTGA TTCTCACCGC GGCAGGCGAC
ATCACGAACA GCTCGAGCGC GAACAACCTC GGGATCATCT TTGCGGCCAA CGGCCAGACG
AAGCTGACCG CTGGCGGCAA CATCATTAAC GATAACGCCC GCATCCTGTC AAACGGCGCA
GTAAGCCTCA ACGCAGCCGG CGACGTCCGG AACATCATCG ACCATACTGG CGGCACGAAT
GGCGGCCAGC CGACCGCCTA CACGGACCGC GGCGGCAGCT TCCTGTTCTT CACGCACACG
ACGAGCGGCT TCAACGTCGA CTATGGCACC GTCAGTAATC CCAACCAGCT CGCCTATATC
GCGGCCGTGC ACGGCCCGGT GACGATCACG AGTCGCAACT TCACGAATGC CGGCGGAATC
GTTCAATCGA ACGAAGGTGA CGTCAACATT GCCGCGCAAA ATAACTTTAC CAATGCCGCG
GTCTTCACGG GACAAGCCAG CTATACGCGT AGTTGCTGGA TTTTCTGCCA CGCCGACGCG
TCGAGTAATG TCACACCGTA CGGCGGCACG ATTCAGGCCG GCGGCAACAT CGGCATCAAG
GCAGGCGCGG TGGCCCGCAA CGTCGGCGGC AATGTTTTTG CAACCGGCAA CATCAAGGTC
GACGCGCCCG TCACTTATGC GCAAGGCGTG ACCGGCTACT CGGCCATTAA CCAGCATCGC
GGTTTCAAGG CGTTCTTCGG CAGCACCTGG GCGCAGATCA TCGCGATGGA TATTGGCGGC
GGCTTCACCG CGAACGGCAG CGTGACGCTG ACGGGCGATG GCGTGATCGA CGGCGGCTCG
TTCAGCGGCG GGAAGGGCGT CACGGCGGCC GGCGGTATCA CCACGGTGCG CGCACCATCG
CGCACGCCCG TCCAGATCGA CCAGCATCTC GGCCTGACGA CGTGGTGGTG GCGATGA
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| Protein sequence | MLRQTIRRTL ALTGAGLSCS VLAAGIVPDG GTPTVVGIGV GGRQTVNIAP AIGGVSNNTY
SSFNVSKAGA DLNNIGINAR TIVNQVTSTN PSLIQGNINV LGPRANVILA NPNGVTIDGG
SFTNTGHVVL STGQVSFSDL TLAPGIVQRN VVLTTDRGAI TIGPGGLSGT LVNLDLIAKQ
LSINGPVTNA FTSSTSGIRA IAGDSKTTYD TSFSPSDNGH DWLIGTSSPG TKSNAVAVDI
TAAGGLTAGR VQLIVTDQGA GVRSLGKIYA NAGDVVVAAN GDITVADGSL KAERDIVLTT
PGAVSLTGAQ VTAANNATIQ AGNIALSDDT IGQTTLTAGN TVSLTSSGAI TNTGSLIQAG
TTASDGTTTG GDVILTAAGD ITNSSSANNL GIIFAANGQT KLTAGGNIIN DNARILSNGA
VSLNAAGDVR NIIDHTGGTN GGQPTAYTDR GGSFLFFTHT TSGFNVDYGT VSNPNQLAYI
AAVHGPVTIT SRNFTNAGGI VQSNEGDVNI AAQNNFTNAA VFTGQASYTR SCWIFCHADA
SSNVTPYGGT IQAGGNIGIK AGAVARNVGG NVFATGNIKV DAPVTYAQGV TGYSAINQHR
GFKAFFGSTW AQIIAMDIGG GFTANGSVTL TGDGVIDGGS FSGGKGVTAA GGITTVRAPS
RTPVQIDQHL GLTTWWWR
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