Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5348 |
Symbol | |
ID | 6181096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2570014 |
End bp | 2571015 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641685103 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001812008 |
Protein GI | 172064357 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGTTT CCGAATATCC GCAGGTGCTC GTGAGCGAGG TGGGGCCGCG TGACGGCCTG CAGAGCATCA AGGCCGTGAT GCCGACGGCC GACAAGTTGC GCTGGATCAC CGCGCTCGCC GCGGCCGGCC TGCGCGAAAT CGAGGTCGGA TCGTTCGTGC CCGCGCGACT GTTGCCGCAG ATGACCGACG TCCGGGAAGT CGTCGCGTAT GCGCTGGCGA TTCCGGGGCT GCGCGTCGCC GCGCTCGCGC CGAACCTGCG CGGCGCCGAA AACGCGTTCG AGGCGGGCGT CCACAAGCTG ACGTTGCCGG TATCCGTGAC CGAAGCGCAC TCCTTGGCGA ACATCCGCAA GACCCCGGCG CAGATGATCG ACGAGGTGCG CACGATCGTC GCGCTGCGCG ATGCGCGGTT TCCGTCGGTG CAGATCGAGG CGGGCGTTTC GGTGGCGTTC GGTTGCACGC TCGCCGGCGC GGTCTCCGAC GACGAGACGA TCGCGATGGC GGCCGCGATG GCCGAATGCG GCGTCGACGA GATCGGACTC TCCGATACGA GCGGCTATGC CAACCCGGCG CAGGTGCGCC GGCTGTTCAT GCGCCTGCGG CGCGAAGTCG GCGACAAGGC CGGCGGCGCG CACTTCCACA ACACGCGCGG GCAGGGGCTT GCGAACGTCG TCGCGGCGCT CGACGCCGGC GTGACGACGC TCGACGCGAG CCAGGGCGGC CTGGGCGGCT GTCCGTATGC GCCGGGTGCG ACCGGCAACA TCGTCACCGA GGATCTTGTG TTCCTGCTGG AGTCGATGGG GTACGACACG GGCGTCGACG TGGACGCGCT GCTCGCCGCG CGCGCGATCC TGCACGCGGC GCTCCCAGCC GAGGCGCTCT ACGGCCACGT GCCGGACGCG GGGCTGCCGA AGGGGTTCCG CTATGCGGAC GGCCGGTATG CGAACGGCCG CGCGCCGAGC ACGACCCAGC CCAAAGGATG CGTGACGGGA GTCGCGCAAT GA
|
Protein sequence | MSVSEYPQVL VSEVGPRDGL QSIKAVMPTA DKLRWITALA AAGLREIEVG SFVPARLLPQ MTDVREVVAY ALAIPGLRVA ALAPNLRGAE NAFEAGVHKL TLPVSVTEAH SLANIRKTPA QMIDEVRTIV ALRDARFPSV QIEAGVSVAF GCTLAGAVSD DETIAMAAAM AECGVDEIGL SDTSGYANPA QVRRLFMRLR REVGDKAGGA HFHNTRGQGL ANVVAALDAG VTTLDASQGG LGGCPYAPGA TGNIVTEDLV FLLESMGYDT GVDVDALLAA RAILHAALPA EALYGHVPDA GLPKGFRYAD GRYANGRAPS TTQPKGCVTG VAQ
|
| |