Gene BamMC406_5348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5348 
Symbol 
ID6181096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2570014 
End bp2571015 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID641685103 
Productpyruvate carboxyltransferase 
Protein accessionYP_001812008 
Protein GI172064357 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTT CCGAATATCC GCAGGTGCTC GTGAGCGAGG TGGGGCCGCG TGACGGCCTG 
CAGAGCATCA AGGCCGTGAT GCCGACGGCC GACAAGTTGC GCTGGATCAC CGCGCTCGCC
GCGGCCGGCC TGCGCGAAAT CGAGGTCGGA TCGTTCGTGC CCGCGCGACT GTTGCCGCAG
ATGACCGACG TCCGGGAAGT CGTCGCGTAT GCGCTGGCGA TTCCGGGGCT GCGCGTCGCC
GCGCTCGCGC CGAACCTGCG CGGCGCCGAA AACGCGTTCG AGGCGGGCGT CCACAAGCTG
ACGTTGCCGG TATCCGTGAC CGAAGCGCAC TCCTTGGCGA ACATCCGCAA GACCCCGGCG
CAGATGATCG ACGAGGTGCG CACGATCGTC GCGCTGCGCG ATGCGCGGTT TCCGTCGGTG
CAGATCGAGG CGGGCGTTTC GGTGGCGTTC GGTTGCACGC TCGCCGGCGC GGTCTCCGAC
GACGAGACGA TCGCGATGGC GGCCGCGATG GCCGAATGCG GCGTCGACGA GATCGGACTC
TCCGATACGA GCGGCTATGC CAACCCGGCG CAGGTGCGCC GGCTGTTCAT GCGCCTGCGG
CGCGAAGTCG GCGACAAGGC CGGCGGCGCG CACTTCCACA ACACGCGCGG GCAGGGGCTT
GCGAACGTCG TCGCGGCGCT CGACGCCGGC GTGACGACGC TCGACGCGAG CCAGGGCGGC
CTGGGCGGCT GTCCGTATGC GCCGGGTGCG ACCGGCAACA TCGTCACCGA GGATCTTGTG
TTCCTGCTGG AGTCGATGGG GTACGACACG GGCGTCGACG TGGACGCGCT GCTCGCCGCG
CGCGCGATCC TGCACGCGGC GCTCCCAGCC GAGGCGCTCT ACGGCCACGT GCCGGACGCG
GGGCTGCCGA AGGGGTTCCG CTATGCGGAC GGCCGGTATG CGAACGGCCG CGCGCCGAGC
ACGACCCAGC CCAAAGGATG CGTGACGGGA GTCGCGCAAT GA
 
Protein sequence
MSVSEYPQVL VSEVGPRDGL QSIKAVMPTA DKLRWITALA AAGLREIEVG SFVPARLLPQ 
MTDVREVVAY ALAIPGLRVA ALAPNLRGAE NAFEAGVHKL TLPVSVTEAH SLANIRKTPA
QMIDEVRTIV ALRDARFPSV QIEAGVSVAF GCTLAGAVSD DETIAMAAAM AECGVDEIGL
SDTSGYANPA QVRRLFMRLR REVGDKAGGA HFHNTRGQGL ANVVAALDAG VTTLDASQGG
LGGCPYAPGA TGNIVTEDLV FLLESMGYDT GVDVDALLAA RAILHAALPA EALYGHVPDA
GLPKGFRYAD GRYANGRAPS TTQPKGCVTG VAQ