| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5347 |
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| Symbol | |
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| ID | 6180807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2568704 |
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| End bp | 2570017 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641685102 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001812007 |
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| Protein GI | 172064356 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC GCCAACCGGC TTCGGCGCTG CCGTACGAAG GCGTGCGCGT GATCGAGATG
ACGCACATGG TCATGGGCCC GACCTGCGGG ATGCTGCTCG CGGATCTCGG TGCGGAAGTC
ATCAAGATCG AACCGATCGC GGGTGACGGC ACGCGTGGGC TGCGCGGTTC CGGCGCGGGC
TTCTTCGGGA TGTTCAACCG CAACAAGAAG AGCCTGGCCG TCGACGTGAA GGATCCGCGC
GGGCTCGAGA TCGTGCGGCG GCTCGTCGCG ACGGCCGATG TGTTCAGCGA GAACTTCAAG
AGCGGCACGA TGGACCGCCT CGGCCTCGGT CATGCCGCGC TGTCCTCGCT GAATCCCCGC
CTGGTGTACG TGTCGCACAA GGGCTTTCTG CCGGGGCCGT ACGAACATCG CACCGCGCTC
GACGAAGTCG TGCAGATGAT GGGCGGCCTC GCGTACATGA CGGGCCCCGA AGGCCGGCCG
TTGCGTGCGG GCTCGAGCGT CAACGACATC ATGGGCGGGA TGTTCGGCGC GATCGGCGCA
ATGGCCGCGC TCGCGCAGCG CGAACGCACC GGCTGCGGCC AACAGGTGCA GAGTTCGCTG
TTCGAGAACA ACGTGTTCCT GGTCGCGCAG CACATGATGC AGTTCGCGGT GACGGGGCAG
GCCGCGTCGC CGATGCCGAG CCGGATTTCC GCATGGGCGG TCTACGACGT GTTTTCGGTG
CGGGACGGCG AGCAGATCTT TCTCGCGGTC GTGTCGGACA CGCAATGGGC GCTGTTCTGC
GACGCGTTCG GCCTGGCCGC GCTGAAGGAC GATGCGCGCC TTGCGACGAA CAACCTCCGC
GTGCAGGCCC GCGAGTGGCT GCTGCCCGAA CTGCGTGCGC GGCTTGCCGC GCATTCGGCC
GCGGAGATCG GCGCGATCTT CGAATCGATC GGCCTCCCGT ATGCGCCGAT CACGAAGCCG
CAGGACCTGT TCGACGATCC GCATCTGCTC GCGACCGGGG GCCTCGAAGC CGTGACGCTG
CCGGCCGACG CGAGCAGCGC CGGCCGGCCG GTCGACACGC GCACCGCGCT GCTGCCGCTC
ACGCTTGGCG GGGAGCGCCT GAGGCTGCGC TCGGCGCCGC CCGCGCTCGG CCAGGACACG
TGCGCGCTGC TCGGCGAGCT GGGTTATACG CCGGACGAGG CACGCGCGCT GATCGACGCG
GGCGTCGTCG CGGGGCGGCA CGGACACGGT GCGAACGGGC CGCCGCCGGG CGTACCGGGC
GTACCCACCG TACCGAGCGA CATGCCTTCG CCGAACGAGG CGGCGAGCGC GTAG
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| Protein sequence | MNDRQPASAL PYEGVRVIEM THMVMGPTCG MLLADLGAEV IKIEPIAGDG TRGLRGSGAG
FFGMFNRNKK SLAVDVKDPR GLEIVRRLVA TADVFSENFK SGTMDRLGLG HAALSSLNPR
LVYVSHKGFL PGPYEHRTAL DEVVQMMGGL AYMTGPEGRP LRAGSSVNDI MGGMFGAIGA
MAALAQRERT GCGQQVQSSL FENNVFLVAQ HMMQFAVTGQ AASPMPSRIS AWAVYDVFSV
RDGEQIFLAV VSDTQWALFC DAFGLAALKD DARLATNNLR VQAREWLLPE LRARLAAHSA
AEIGAIFESI GLPYAPITKP QDLFDDPHLL ATGGLEAVTL PADASSAGRP VDTRTALLPL
TLGGERLRLR SAPPALGQDT CALLGELGYT PDEARALIDA GVVAGRHGHG ANGPPPGVPG
VPTVPSDMPS PNEAASA
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