Gene BamMC406_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5342 
Symbol 
ID6179305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2564287 
End bp2564865 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID641685097 
Producthypothetical protein 
Protein accessionYP_001812002 
Protein GI172064351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.317279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT CCCACGTCGC CTTCACCCTC ACGGGCCTGC TCGTCGCGCT GCCGATCGCC 
GCCTACGCGC TCGTCAAGCC GCTGCGCGTC GTCGCGCCCG CGCTGCTTCC CGGCGTGTCA
TGCCCGAGCG CGGACATCTG CACCGACGAT GCCGCGAAGT TCGACGCCGC GAAGCAGCTC
TATCGCGACG GCTACGCGCG CGCGGCGGCG GCCGTGGGCC CGTTTCGCGA CGCACCGCGC
GTCGTGTTCT GCTCGACGCG CGAATGTGCG GACGAGTTCG GCCTCGGCGA ACGCGCGGCC
CTCACTCTTG GAGATTTCGG CGTGGTCATC GCGCCGCGCG GCTGGCAGAC CTACTTTCTC
GCGCACGAAC TGATCCACCA CCGGCAGGCC GAAGTGCTCG GCAACCTCGC GGTCGTGACC
AAGCCGCGCT GGCTGATCGA AGGGATGGCG TATGCGCTCA GCGATGATCC GCGTCATCCG
CTGAAGGAGC CGTTCGAGTC GTGGCGCGCG CGATTCGGCG CGTGGCATGC GGCGCTGGGT
GGGCGGACGC TGTGGGACGC CGCACGGGCC GTGGAATAG
 
Protein sequence
MKRSHVAFTL TGLLVALPIA AYALVKPLRV VAPALLPGVS CPSADICTDD AAKFDAAKQL 
YRDGYARAAA AVGPFRDAPR VVFCSTRECA DEFGLGERAA LTLGDFGVVI APRGWQTYFL
AHELIHHRQA EVLGNLAVVT KPRWLIEGMA YALSDDPRHP LKEPFESWRA RFGAWHAALG
GRTLWDAARA VE