Gene BamMC406_5341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5341 
Symbol 
ID6181155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand+ 
Start bp2563671 
End bp2564255 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID641685096 
ProductTetR family transcriptional regulator 
Protein accessionYP_001812001 
Protein GI172064350 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.601109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCT CGAGACAACA GGCTGCCGAC AACCGCAACG CGATCGTCGC GGCCGCCGAG 
CGGCTGTTCC GGGTGCGCGG TGTCGACGCG GTCGGTTTGA CGGAACTGAT GAAGGAAGCC 
GGTTTCACGC AGGGCGGCTT CTACAACCAC TTCAAATCGA AGGATGCGCT GGTCGCCGCG 
GTGATGGAAA AGGCGATGCA GGACGGCGCG GATTCGCCGC GCGCCGGCAG CGTCGCGCAA 
CAGGTGACGT CGTACCTGTC GACCGCGCAT CGCGACAACG TCGAAGCCGG CTGCCCGCTG 
TCCGCCTTCG CGGGCGACGC GCCACGCCTG ACCGACGCGG CACGCGCCTG CTACGCGCAC 
GGCGTCGCCG GCTATCTCGA GCGGCTGGAA CGGATGGTGG CAGTCGAAGG CGCGGCCGCG 
GCGGACACGC GCCGCGACGC GATCGCGGTG TTCAGCCAGA TGGTCGGCGC GCTCGTGCTG 
TCGCGCGCGG TCGCCGGCAC CGATCCGGCG CTGGCCGATG AAATCCTCGA CGCGGGGCGG 
CGCACGCTCG CCGGCCAGCC CGACGATCCG GCCGTGCCGG CGTAG
 
Protein sequence
MGVSRQQAAD NRNAIVAAAE RLFRVRGVDA VGLTELMKEA GFTQGGFYNH FKSKDALVAA 
VMEKAMQDGA DSPRAGSVAQ QVTSYLSTAH RDNVEAGCPL SAFAGDAPRL TDAARACYAH 
GVAGYLERLE RMVAVEGAAA ADTRRDAIAV FSQMVGALVL SRAVAGTDPA LADEILDAGR 
RTLAGQPDDP AVPA