| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5340 |
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| Symbol | |
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| ID | 6181154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2562666 |
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| End bp | 2563370 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641685095 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001812000 |
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| Protein GI | 172064349 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.980591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG AAGGTGCAGT CGTTTTCGTC ACGGGCGCGA ACCGCGGGCT TGGCCTCGAA
TTCGCGAAGC AGGCGCTGGA ACGCGGGGCG CGGAAGGTCT ATGCGGGTGC GCGCGATCCG
GCCAGCGTGA CGCTGCCGGG CGTGGTGCCC GTGAAGCTCG ACGTGACCGA TCCGGCGGCG
GTCGCCGCGG CCGCTGACGC CGCGCGCGAC GTCACGTTGC TGATCAACAA CGCGGGCATC
GCGCGGCTCG GCAGCCTGAC CGACGACGGC GCCGTCGACG CGTTGCGCGA TCACCTCGAA
ACCAACGTGT TCGGGATGCT GGCGATGTCG CGCGCATTCG CGGCCACGCT CGCCGGCCAC
GGCGGCGGCG CGATCCTGAA CGTGCTGTCC GTCGCGAGCT GGGTGAACCG GCCGATCCTG
TCGGGCTACG GCGTGTCGAA GTCGGCCGCA TGGGCGCTGA CCAACGGGCT GCGGCATTCG
CTGCGCGAGC AGCGCACGCA GGTGGTGGGG CTGCATGCCG GCTTCATCGA TACGGACCTG
ACACGCGGCC TGGACGTGCC GAAGGCGATG CCGGCCGACG TCGTGCGTCA GGCCTACGAC
GCGATCGAAT CCGGAGCGGA GGAGGTGGCC ACCGACGACT TCACGCGGCA GGTGAAGGCC
ACGCTGTCGG CCGGTGTCTA TCTGGACGAG GCGGCGCCGG TCTGA
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| Protein sequence | MKIEGAVVFV TGANRGLGLE FAKQALERGA RKVYAGARDP ASVTLPGVVP VKLDVTDPAA
VAAAADAARD VTLLINNAGI ARLGSLTDDG AVDALRDHLE TNVFGMLAMS RAFAATLAGH
GGGAILNVLS VASWVNRPIL SGYGVSKSAA WALTNGLRHS LREQRTQVVG LHAGFIDTDL
TRGLDVPKAM PADVVRQAYD AIESGAEEVA TDDFTRQVKA TLSAGVYLDE AAPV
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