| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5311 |
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| Symbol | |
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| ID | 6179864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2532948 |
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| End bp | 2534108 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641685066 |
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| Product | porin |
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| Protein accession | YP_001811971 |
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| Protein GI | 172064320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAGA AACTGTTGAC CATCGCCATC CTCGCAGCAA CGGCCGGCAC GGCACACGCG
CAAAGCAGCG TGACCCTGTA CGGCGTGATC GACGCCGGTA TCAGCTACGT GAACCACAGC
AAGACCGCAA ACGGCGGCAG CGGCAAGTTG TTCAAGTACG ACGACGGCGT GGCCCAGGGC
AGCCGTTGGG GCCTGCGCGG CACCGAAGAC CTCGGTGGCG GCCTGAAGGC GATCTTCGTG
CTCGAAAACG GCTTCAACAG CGGCAACGGC GCGATCGGCC AGGGTGGCGC GATCTTCGGC
CGCCAGGCTT ACGTCGGCCT GAGCCAGTCG CAATTCGGCA CGGTCACGCT CGGCCGTCAG
TACTCGTTCT CGACCGACAT CCTCGGTTCG AACTACTCGA CGGGCGGCAA CACGGTCGCG
GGCAACTACG CGTACCACGT GAACGACGTC GACCAGCTCA CGTCGAGCCG CATCAACAAC
GCGGTGAAGT TCCAGAGCGC GAACTACGCC GGCTTCACGT TCGGCGCGTT GTACGGCTTC
TCGAACTCGA CCGACTTCGC CGGCGCACCG GCGACGACGA CGGGCACCAC GACGACGGCC
GGCTCGTCGC GTGCATACAG CTTCGGCGTG AACTACGCGA ACGGCCCGTT CGCACTCGGC
GCGGCCTACA CGGACATCCG CTTCCCGAGC CAGTCGTCGC CGGCATTCTC GACGACGATC
GCGAACATCA GCACGGGTAA CATCCGCGAC CTGCGCACGT ACGGCGTCGG CGGCCGCTAC
ATCTTCGGCC CGGCAACGGC ATGGGCGCTG TGGACGCGCA CGCAGTTCAC CCCCGTCGCA
GCCGGCGCAT CGGGCACGTT CTACAACGCA TACGAAGCTG GCCTGAAGTA CGCGTTCACG
CCGGCCCTGT CGGCAGCAGC GGGCTACACG TACACGAACG CCACGCAAAA CGGCGGCTCG
GCACACTGGA ACCAGGGCAA CCTGGGCCTG GACTACGCGC TCAGCAAGCG TACGGACGTG
TACGGCCTGG TCGTCTACCA GAAGGCGTCG GGCAACAACG TGCAAGCTCA GATCGGCTCG
AGCACGAGCT ACTTCAACAC GTCGGGCACG GGTTCGTCGA ACCAGCTGGC CGCTCGCGTC
GGTATCCGTC ACAAGTTCTA A
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| Protein sequence | MNKKLLTIAI LAATAGTAHA QSSVTLYGVI DAGISYVNHS KTANGGSGKL FKYDDGVAQG
SRWGLRGTED LGGGLKAIFV LENGFNSGNG AIGQGGAIFG RQAYVGLSQS QFGTVTLGRQ
YSFSTDILGS NYSTGGNTVA GNYAYHVNDV DQLTSSRINN AVKFQSANYA GFTFGALYGF
SNSTDFAGAP ATTTGTTTTA GSSRAYSFGV NYANGPFALG AAYTDIRFPS QSSPAFSTTI
ANISTGNIRD LRTYGVGGRY IFGPATAWAL WTRTQFTPVA AGASGTFYNA YEAGLKYAFT
PALSAAAGYT YTNATQNGGS AHWNQGNLGL DYALSKRTDV YGLVVYQKAS GNNVQAQIGS
STSYFNTSGT GSSNQLAARV GIRHKF
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