| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5310 |
|---|
| Symbol | |
|---|
| ID | 6179863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 2531834 |
|---|
| End bp | 2532640 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641685065 |
|---|
| Product | YaeC family lipoprotein |
|---|
| Protein accession | YP_001811970 |
|---|
| Protein GI | 172064319 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTT CGATCCTGAC CGGCCTCGGC GCGCTTGCCG CGGCGCTGGC CTTTGCCGCG
CCCGGCGCGC ACGCCGACCC GCAGACGCTG AAGATCGGCA CGATGAGCGG CCCCGACGCG
CAGATCTGGA CCGAGGTGAC GAAAGTCGCC GCACGCGAGG GCCTCGCGAT CAAGGTCATC
GAATTCAACG ATTACGTGCA GCCGAACGCC GCGCTCGACG CGGGCGACCT CGATGCGAAC
GGCTTCCAGC ACCAGCCGTT TCTCGACAGC CAGATCAAGC AGCGCGGCTA CCGGATCGTC
AATGTCGGGC TGACCTACAC GGCGCCGATG GGCTTCTATT CGAAGAAGCT CAAGTCGCTG
AAGGACTTGC CGGCCGGCGC GAAGGTCGGG ATCCAGAACG ATCCGTCGAA CGGCAACCGC
GCGCTGCTGC TGCTGCAGAA ATACGGGGTG ATCAAGCTGA AGGCGGGCGC CGGCACGAAC
GGCGTGAACG CGACGCCGCT CGACGTCGCG GAGAATCCGA AGAAGATCAG GATCGTGGAG
CTCGACGCCG CGCAACTGCC GCGCGCGCTG CCCGACCTCG ACGCCGCGTC GATCAACACC
GACTACGCGG TGAAGGCCGG GCTCACGCCG GCGAAGGATG CGATCGCGAT CGAGGATCTG
CGCGGGCCGT ACGCGAACCT GATCGCGGTG CGCGCGCAGG ACAAGGACAA GCCGTGGGTG
AAGAAGCTCG TCGCGGCCTA TGAGTCGGAC GACGTGCGCA AGTTCATCGA CCAGAAGTTC
GGCGGCGCGA TCGTGCCGGC GTTCTGA
|
|---|
| Protein sequence | MRRSILTGLG ALAAALAFAA PGAHADPQTL KIGTMSGPDA QIWTEVTKVA AREGLAIKVI
EFNDYVQPNA ALDAGDLDAN GFQHQPFLDS QIKQRGYRIV NVGLTYTAPM GFYSKKLKSL
KDLPAGAKVG IQNDPSNGNR ALLLLQKYGV IKLKAGAGTN GVNATPLDVA ENPKKIRIVE
LDAAQLPRAL PDLDAASINT DYAVKAGLTP AKDAIAIEDL RGPYANLIAV RAQDKDKPWV
KKLVAAYESD DVRKFIDQKF GGAIVPAF
|
|---|
| |