| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5308 |
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| Symbol | |
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| ID | 6180022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2529506 |
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| End bp | 2530288 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641685063 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001811968 |
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| Protein GI | 172064317 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000841131 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAGA TTCTTGCGGC TGTGACCGTG GCCGTGCTCG CCGTGTCGGC CGGCACCGCA
TACGCGAAGG ACTGGACGAC CGTGCGCTTC GGCGTCGACG CAAGCTACCC GCCTTTCGAA
TCGAAAGACG CGAGCGGCAA GGTGGTCGGT TTCGACGTCG ATCTCGGCAA CGAGATTTGC
CGCCGCATGA ACGCGAAGTG CGTGTGGATC GAAAACGACT TCGACGGGAT GATCCCGGCA
CTGAAGGCAC GCAAGTTCGA CGGCGTCCTG TCGTCGATGT CGATGACGCC GGCGCGCCAG
GAACAGATCG CGTTCTCCGA GAAGCTGTTC AACACGCCGA CGCGCCTCGT CACGAAGAAG
GGCTCAGGCC TGATGCCGAC CGCCGAATCG CTGAAGGGCA AGTCGATCGG TGTCGAGCAG
GGCACGATCC AGGAAACCTA TGCGAAGACG TACTGGGCCG CGAAGGGCGT GAAGGTCGTG
CCTTACCAGA ACCAGGACCA GGTCTACGCC GACCTGATCG CGGGCCGTCT GGACGGCGCG
CTGCAGGATG CGGTGCAGGC CGAGATCGGC TTCCTGAAGA CCCCGCGCGG CGCGAACTTC
GATTTCGCCG GCAAGGACAT CGACGATCCG AAGACGCTCG GCAACGGCGC GGGCATCGGC
CTGCGCAAGG AAGACACCGA CCTGAAGGCG AAGATCGACA GCGCGATCAC GGGCATGCGC
AAGGACGGCA CGTACCAGAA GATCGCGAAG AAGTACTTCG ATTTCGACGT GTACGGCAAG
TAA
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| Protein sequence | MKKILAAVTV AVLAVSAGTA YAKDWTTVRF GVDASYPPFE SKDASGKVVG FDVDLGNEIC
RRMNAKCVWI ENDFDGMIPA LKARKFDGVL SSMSMTPARQ EQIAFSEKLF NTPTRLVTKK
GSGLMPTAES LKGKSIGVEQ GTIQETYAKT YWAAKGVKVV PYQNQDQVYA DLIAGRLDGA
LQDAVQAEIG FLKTPRGANF DFAGKDIDDP KTLGNGAGIG LRKEDTDLKA KIDSAITGMR
KDGTYQKIAK KYFDFDVYGK
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