Gene BamMC406_5301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5301 
Symbol 
ID6180837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2522308 
End bp2522844 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID641685056 
Producthypothetical protein 
Protein accessionYP_001811961 
Protein GI172064310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.231819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGCC CTTCCACGAC ACGCGACATG TTGCTGGCCT TCGCGGCCGG TCTTTCATTC 
GCGGCCTGCG CCGCGCCGGT CTATGCCGAC GATGCCACCG GCCTCGCACC GCCCGCTCCC
GCGACACCCG TGCTGTCGAC GACCGCGACC GGCGTGCAGA TCTACGCATG CGAATACGAT
GCCGACCACC GGCTCGCGTG GGCATTCCAG CGCCCGGAAG CAATGCTGTT CGATGCCGAC
GGCACGCTCG TCGTGCGGCA CGGCGCGGGG CCGTCGTGGG AAGCGCTCGA TGGCAGCCGC
ATCACCGGCA AGAAGCTCGT GGAAGCGCCG AGCGCGCGCG TCGGCAGCGT TCCTCAATTG
CTGCTCGCCG CGACGCCGGC CGCAACGGGC ACGAAGGCCA CGACCGGCAC GCTCGCCGGT
GTGCGCTTCG TGCAGCGGCT CGACACCGCG GGCGGCACGC CGCCGGAAAC CGCGTGCTCG
ACCGAACATG CGGTCGGCCG CTTTCCGTAT TTCGCGCGCT ACGTGTTCCT GAAGTAA
 
Protein sequence
MPSPSTTRDM LLAFAAGLSF AACAAPVYAD DATGLAPPAP ATPVLSTTAT GVQIYACEYD 
ADHRLAWAFQ RPEAMLFDAD GTLVVRHGAG PSWEALDGSR ITGKKLVEAP SARVGSVPQL
LLAATPAATG TKATTGTLAG VRFVQRLDTA GGTPPETACS TEHAVGRFPY FARYVFLK