Gene BamMC406_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5300 
Symbol 
ID6180836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2521114 
End bp2522118 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID641685055 
Productpyridoxal 4-dehydrogenase 
Protein accessionYP_001811960 
Protein GI172064309 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.180992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCA CGCTTCCTTC CCGCCTGGGT TTCGGCACCG CGCCGCTGGG CAACATGTAC 
CGGGACATCC CGCACGAAGA AGCGCTGGCC ACCGTCGATG CCGCGTGGCG TGGCGGCATC
CGCTACTTCG ACGCCGCGCC GCTGTATGGC GCCGGCCTCG CCGAGCTGCG TCTCGGTGAA
GCGCTCGCCG GACGGCCGCG CGACGAATAT TCGCTTGGCA CCAAGGTCGG CCGGCTCGTC
CTCGACGAAC ACGAGGACGC GTCGCAACGC GATCTCGGCG AAAAAGGCGG GCTGTTCCGT
CACGGGCTGC CGAACCGGAT CGTCTACGAC TACACCGCGG ACGGCACGCT GCGCTCGATC
GAGGCCAGCC TCGCACGGCT GCGCACCGAC CGGCTCGACA CCGTGTGGAT TCACGATCCG
GCCGTCGATT TTCACGGCGA CGCATGGCGC GACGTGTTCG ACGTCGCGAT GTCGGGCGCG
GCGAAGGCGC TCACGCGGCT GCGCGACGAG AAGGTCATCA AGGGCTGGGG GCTCGGCGTG
AACCGCGTCG AGCCGTGCGA ACTCGCACTC GAACGTTCGG ATCCCGACGG CTTCCTGCTC
GCCGGGCGCT ATACGCTGCT CGATCACGCG GGCGCGCTCG AACGGCTGAT GCCGGCAAGC
GCCGCGCGCG GGCTCGGGAT CATCGTCGGC GGCCCGTACA ACTCGGGCGT GCTGGCGGGC
GGCACGCATT TCGAGTACCA GCCGGCCACG CAGGCGATGC TCGAGCGCGT CGCGCGGATT
CGCGGGCTCT GCGAACGGTT CGGTGTCGAC GTTCGCGCGG TGGCCTTGCA GTTTTCGCTC
GCGCATCCGG CCGTCGCGGC CGCGATCCCC GGCGCGAGCC GGCCCGAGCG CATCGACGAG
AACCTGCGTC TCGCGGCGGC GCCGATTCCG GCCGCACTGT GGGCGGCGTT GAAGGCCGAG
CACCTGATTG CCGAGCACGC ACCGACGCCG GCCAGCGCGG TTTGA
 
Protein sequence
MRITLPSRLG FGTAPLGNMY RDIPHEEALA TVDAAWRGGI RYFDAAPLYG AGLAELRLGE 
ALAGRPRDEY SLGTKVGRLV LDEHEDASQR DLGEKGGLFR HGLPNRIVYD YTADGTLRSI
EASLARLRTD RLDTVWIHDP AVDFHGDAWR DVFDVAMSGA AKALTRLRDE KVIKGWGLGV
NRVEPCELAL ERSDPDGFLL AGRYTLLDHA GALERLMPAS AARGLGIIVG GPYNSGVLAG
GTHFEYQPAT QAMLERVARI RGLCERFGVD VRAVALQFSL AHPAVAAAIP GASRPERIDE
NLRLAAAPIP AALWAALKAE HLIAEHAPTP ASAV