Gene BamMC406_5293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5293 
Symbol 
ID6181439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2513768 
End bp2515243 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content67% 
IMG OID641685048 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_001811953 
Protein GI172064302 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.348046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATC AGCCCAACCA GACCGAAGCC GACCAGCCCG TCGACATGAT CATCTTCGGC 
GGCGGCGGCG ACCTGGCCGC CCGCAAGCTG TTGCCCGCGC TCTACATGGC GCACCTGCAC
TGCAACCTGC CGCCGCAGAC GCGCATCATC GCGGTCGGCA GGCGCGACTG GGGCATCGAC
GGCTACCGCA AGTTCATGGA CGAGCAGTCG CGCCCGTTCA TCGACGAGAA GGCGTTCGAC
GCCGATGCAT GGGCCCGCTT CCTCGACCTG TTCAAGTACG TGCTGATCGA CGTGAACGCG
CCGGAAGACT ATGCGCGCCT CGCCGAAGCG GCGCGCCCCG AGGCGATCCA CGTGTTCTAC
CTGTCGACGT CGCCGGAGCT GTTCACGACG ATCTGCGACA ACCTGTCGGC CGCGCACCTC
GTCGATGCGC GCTCGCGCGT CGTGCTCGAA AAGCCGCTCG GCCACGATCT CGCGTCGGCG
CAGGCGATCA ACGATGCGGT CGGCCGGCAT TTCGCGGAAT CGCAGATCTA CCGGATCGAT
CATTACCTCG GCAAGGAAAC CGTGCAGAAC CTGATGGTGC TGCGCTTCGG CAACCCGATC
TTCGGGCCGC TGTGGCAGGC GCCGAGCATC CGCAGCGTGC AGATCACGGT GGCGGAGACG
GTCGGTGTCG GCAGCCGCGC GGGCTTCTAC GACCATACCG GCGCGCTGCG CGACATGGTG
CAGAACCACC TCCTGCAACT GCTGTGCATC GTCGCGATGG AGCCGCCGGT GTCGCTCGAC
CCGGACGCGG TGCGCGACGA GAAGCTGAAG GTGCTGCGCT CGCTGCGGCC GATGGCGCTG
TCGGACGTCG CGCGCGATAC CGTGCGCGGC CAGTACACGG CCGGCGCGGT CGACGGCCAG
CCGGTCAAGG GCTATCTCGA GGAAGACAAC GTGCCGGCGG ACAGCCACGC GGAAACCTTC
GTCGCGCTGC GCGCGCACAT CAACAACTGG CGCTGGGCGA ACGTGCCGTT CTTCCTGCGC
ACCGGCAAGC GGCTGCAGCG TCGCCAGTCG GAAATCGTGA TCGAGTTCGC GGACATGCCG
TTCTCGATCA TCCCGACCGG CCCGCGCCAC TACAGCAACC GCCTCGTGAT CCAGCTGCAG
CCGGAAGAAT CGATCCAGCT GCAGATGCTC GCGAAGGAGC CGGGCAGCGG GATGAAGATG
GTGCCCGTGA GCCTGAACCT CGACCTGCAG CAGGCGATTC CGGAACGGCG CGCGGAAGCC
TACGAGCGGC TGCTGATCGA CGTGATCCGC GGGCGTCTCA CGCACTTCAT GCGCCGCGAC
GAGCTCGAGG CCGCGTGGTC GTGGGTCGAG CCGATCCTCA ACGGCTGGAA GCAGCTCGGC
GATCGTCCGC GTCTCTATAC GGCCGGCACG TTCGGGCCGG CGGCATCGTC GGCGCTGCTG
GCGCGCGACA ACATGTCGTG GTCCGAGGAA GCCTGA
 
Protein sequence
MTNQPNQTEA DQPVDMIIFG GGGDLAARKL LPALYMAHLH CNLPPQTRII AVGRRDWGID 
GYRKFMDEQS RPFIDEKAFD ADAWARFLDL FKYVLIDVNA PEDYARLAEA ARPEAIHVFY
LSTSPELFTT ICDNLSAAHL VDARSRVVLE KPLGHDLASA QAINDAVGRH FAESQIYRID
HYLGKETVQN LMVLRFGNPI FGPLWQAPSI RSVQITVAET VGVGSRAGFY DHTGALRDMV
QNHLLQLLCI VAMEPPVSLD PDAVRDEKLK VLRSLRPMAL SDVARDTVRG QYTAGAVDGQ
PVKGYLEEDN VPADSHAETF VALRAHINNW RWANVPFFLR TGKRLQRRQS EIVIEFADMP
FSIIPTGPRH YSNRLVIQLQ PEESIQLQML AKEPGSGMKM VPVSLNLDLQ QAIPERRAEA
YERLLIDVIR GRLTHFMRRD ELEAAWSWVE PILNGWKQLG DRPRLYTAGT FGPAASSALL
ARDNMSWSEE A