Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5285 |
Symbol | |
ID | 6180570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2504759 |
End bp | 2505496 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641685040 |
Product | OmpW family protein |
Protein accession | YP_001811945 |
Protein GI | 172064294 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCA GGTGGACGAC GAGTTTCGCA GGCGTGGCGA TTTGTATCTG CTCGCCTTTG CTTGTCGACG ATGTGCAGGC ACAGACGGCC GGAAGCATTA CGACATCGGT AGGATGGCTA CACATCGCCC CGCAGGGCAG CGCAACGCCC CTGGTCGTGC AAAGTGTCGG CGGCGTCACG GTGAATCAGG AACTGACCGG TAGCAGCGCA CATGCCAGTT CGACAGATAC GCTCGGCATT ACCAACGAGT ACTACGTCAC CGACAACTTC GGCGTCGCGA TGCTTTTTGG CATGCCGCTG AAGGTCAATC TGATTGGCGA CGGGACGTTG CAGAAGTACG GCACGCTCGG CACGACAAGG CCGATGCCGC CCGCGATCGA ACTTCGATAC CACCTGTTTT CTGCCACATC AAAATTCCGG CCGTTCCTGG GCATTGGCGC GAACTATACG TGGTTCACCC AGGTTCGAGC CACCAACAGC CGGTTCGTCT CCGACAGCTT CGGCCCGGGC GGCTCGGCGC ACGCGACACT CAGCGCTTCG TGGAACCCCG TGTTCGAGAT CGGCGCGAAT TACGCGGTGA CAAGACACTG GTCTGTCGGA ACCTCCGTCA GCTACATGCC GGTGAAAACC CACCTCACGT TATACGGACA GACCGCGACC GGGACGCAGA TCGTTTCCAA ATCGACGCTC CGGCTCAATC CCGTCAGCGT TTTCCTGAAC GTCGCCTATA CGTTCTGA
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Protein sequence | MNFRWTTSFA GVAICICSPL LVDDVQAQTA GSITTSVGWL HIAPQGSATP LVVQSVGGVT VNQELTGSSA HASSTDTLGI TNEYYVTDNF GVAMLFGMPL KVNLIGDGTL QKYGTLGTTR PMPPAIELRY HLFSATSKFR PFLGIGANYT WFTQVRATNS RFVSDSFGPG GSAHATLSAS WNPVFEIGAN YAVTRHWSVG TSVSYMPVKT HLTLYGQTAT GTQIVSKSTL RLNPVSVFLN VAYTF
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