Gene BamMC406_5269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5269 
Symbol 
ID6180975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2483805 
End bp2484668 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID641685024 
Productalpha/beta hydrolase fold 
Protein accessionYP_001811929 
Protein GI172064278 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCA TCAACCCGGA CACTCAATCG ACAACGTCGT ATGCACGGGC ACCGAACAAG 
TTCGTCAACG CGGCTGGAAC CCGCTTCGCC TACCGTGAAC TGGGTCCGCA CGGCGGCGTT
CCTTTGGTTT TACTGAATCA CTGGGGAGCC GTGCTGGACA ACTTCGACCC GCGCATCGTC
GATGGCTTGG CGCAAAAACG TCACGTCATC GCGATTGACT ATCGAGGAAT CGGCTTATCC
GGTGGCATCG CGCCCGTGAC CGTGGACGAG ATGGCGCGCG ACACCATCGA GCTGATTCGC
GCAATGGGTA TCGATCAAGT GGATCTGCTC GGCTTCTCGC TTGGCGGTTT CGTCGCGCAG
GACGTGGCGC TCAAGGCGCC GGGTCTGGTG CACAAGCTCA TTCTCACTGG CACGGGCCCC
GCCGGTGGTC ACGGTATCGA TCGTGTCGGC GCCGTGTCCT GGCCACTCAT GCTCAAAGGC
CTGCTCACGC TGCGCGATCC GAAGGCGTAT CTGTTCTTCA CCTCCACAAC CAATGGCCAG
CGGGCGGCAA GCGCGTTCTT GAAACGGTTG AAGGAACGCA AGGCTGGCCG CGACAAGGGT
CCCACACCTC GCGCCTTCCT TCGTCAACTC AAGGCGATCA AGGCGTGGGG CCAGCAGGCG
CCCCAGGACC TCGCGAGTCT GCCCATGCCT GTCCTGATCG CCAATGGGGA CAACGACATC
ATGGTGCCCA CCGCGCTCAG CCGCGATATG GCCCGCCGCA TCCCGCAGGC GCAGCTCGTC
ATTTATCAGG ACGCCGGCCA CGGTGGAATC TTCCAGCATC ACACCAACTT CGTACCCACG
GCGCTGGAAT TTCTGTCGCA ATGA
 
Protein sequence
MKSINPDTQS TTSYARAPNK FVNAAGTRFA YRELGPHGGV PLVLLNHWGA VLDNFDPRIV 
DGLAQKRHVI AIDYRGIGLS GGIAPVTVDE MARDTIELIR AMGIDQVDLL GFSLGGFVAQ
DVALKAPGLV HKLILTGTGP AGGHGIDRVG AVSWPLMLKG LLTLRDPKAY LFFTSTTNGQ
RAASAFLKRL KERKAGRDKG PTPRAFLRQL KAIKAWGQQA PQDLASLPMP VLIANGDNDI
MVPTALSRDM ARRIPQAQLV IYQDAGHGGI FQHHTNFVPT ALEFLSQ