Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5269 |
Symbol | |
ID | 6180975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2483805 |
End bp | 2484668 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641685024 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001811929 |
Protein GI | 172064278 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGCA TCAACCCGGA CACTCAATCG ACAACGTCGT ATGCACGGGC ACCGAACAAG TTCGTCAACG CGGCTGGAAC CCGCTTCGCC TACCGTGAAC TGGGTCCGCA CGGCGGCGTT CCTTTGGTTT TACTGAATCA CTGGGGAGCC GTGCTGGACA ACTTCGACCC GCGCATCGTC GATGGCTTGG CGCAAAAACG TCACGTCATC GCGATTGACT ATCGAGGAAT CGGCTTATCC GGTGGCATCG CGCCCGTGAC CGTGGACGAG ATGGCGCGCG ACACCATCGA GCTGATTCGC GCAATGGGTA TCGATCAAGT GGATCTGCTC GGCTTCTCGC TTGGCGGTTT CGTCGCGCAG GACGTGGCGC TCAAGGCGCC GGGTCTGGTG CACAAGCTCA TTCTCACTGG CACGGGCCCC GCCGGTGGTC ACGGTATCGA TCGTGTCGGC GCCGTGTCCT GGCCACTCAT GCTCAAAGGC CTGCTCACGC TGCGCGATCC GAAGGCGTAT CTGTTCTTCA CCTCCACAAC CAATGGCCAG CGGGCGGCAA GCGCGTTCTT GAAACGGTTG AAGGAACGCA AGGCTGGCCG CGACAAGGGT CCCACACCTC GCGCCTTCCT TCGTCAACTC AAGGCGATCA AGGCGTGGGG CCAGCAGGCG CCCCAGGACC TCGCGAGTCT GCCCATGCCT GTCCTGATCG CCAATGGGGA CAACGACATC ATGGTGCCCA CCGCGCTCAG CCGCGATATG GCCCGCCGCA TCCCGCAGGC GCAGCTCGTC ATTTATCAGG ACGCCGGCCA CGGTGGAATC TTCCAGCATC ACACCAACTT CGTACCCACG GCGCTGGAAT TTCTGTCGCA ATGA
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Protein sequence | MKSINPDTQS TTSYARAPNK FVNAAGTRFA YRELGPHGGV PLVLLNHWGA VLDNFDPRIV DGLAQKRHVI AIDYRGIGLS GGIAPVTVDE MARDTIELIR AMGIDQVDLL GFSLGGFVAQ DVALKAPGLV HKLILTGTGP AGGHGIDRVG AVSWPLMLKG LLTLRDPKAY LFFTSTTNGQ RAASAFLKRL KERKAGRDKG PTPRAFLRQL KAIKAWGQQA PQDLASLPMP VLIANGDNDI MVPTALSRDM ARRIPQAQLV IYQDAGHGGI FQHHTNFVPT ALEFLSQ
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