| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5253 |
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| Symbol | |
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| ID | 6180229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2462404 |
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| End bp | 2463156 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641685009 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001811914 |
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| Protein GI | 172064263 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCT TGCAAGGTAA ACGCACCCTT ATCACCGGCG GCACCAGCGG CATCGGTCTG
GAAACCGCGA AGCAGTTTTT GGCCGAGGGC GCCCGCGTCG TCGTCACGGG AGTCAATCCC
GATTCGATCG CCAAGGCGCA AGCCGAACTT GGACCCGAGG TTCCGGTTCT ACGGGCCGAC
TCGGCCAGCG TCGCTGCCCA AAAGGAACTG GCACAAGCCG TCAAGGACCA CTATGGCCAA
CTAGACGTTG CCTTTCTCAA TGCTGGTGTA TCCGTCTGGT TGCCGATCGA GGAATGGACG
GAAGAGATGT TCGATCGCTC GTTCGATGTC AATGTCAAGG GACCGTACTT CTTGCTCCAG
GCGTTGCTGC CGGTGTTCGC TCGCCCGGCG TCGGTCGTGC TCAACACGTC CGTCAGTGTG
CATGTTGGCG CAGAGCGCTC CTCCGTTTAT GCGGCCACCA AGGCTGCGGT GCTGAATATG
TCGAAGACGC TTTCGGCGGA ACTGCTTGGA CGCGGCGTCC GCGTCAATGC GGTCAGCCCC
GGCCCGGTCG ACACGCCGCT GTACGACAAG CTCGGCATCC CCGACGCCTA CCGCGAACAA
GTCAACAGGG ATATTGCCGC CACCATCCCA CTCGGCCGCT TCGGTACTCC GGAGGAGGTG
GCCAAAGCCG TGCTGTACCT GGCCTCCGAC GAGTCCCGTT GGACGGTCGG ATCGGAAATC
GTCGTGGATG GCGGTCGCAT GCTCAACCGC TGA
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| Protein sequence | MSRLQGKRTL ITGGTSGIGL ETAKQFLAEG ARVVVTGVNP DSIAKAQAEL GPEVPVLRAD
SASVAAQKEL AQAVKDHYGQ LDVAFLNAGV SVWLPIEEWT EEMFDRSFDV NVKGPYFLLQ
ALLPVFARPA SVVLNTSVSV HVGAERSSVY AATKAAVLNM SKTLSAELLG RGVRVNAVSP
GPVDTPLYDK LGIPDAYREQ VNRDIAATIP LGRFGTPEEV AKAVLYLASD ESRWTVGSEI
VVDGGRMLNR
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