| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5240 |
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| Symbol | |
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| ID | 6179408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2444392 |
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| End bp | 2445900 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684996 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001811901 |
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| Protein GI | 172064250 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAA GCGTGTTGTC GGACTGGCTG GCGCAGCGCC TCGTGCGCGG CGGCGAACAG
CCGATCTACC GACAGCTGCA TCGGCTGCTG CAGCAGGCGA TCCTGTCGCG CGAACTGCCG
GCCGGCACGC GCGTGCCGTC GTCGCGGCTG CTCGCGGCCG AGCTCGGGAT CGCCCGCAAC
ACGGTCACGC AGGTTTACGA ACAGCTTGCG CTCGAAGGCT ATGTGAACTC GGCCACCGGG
CGCGGCACGT TCGTCGCCGA CAGCGCGCCC GACGAAATCG TCGGCGCGCC GCCCGATCCG
GCCGCGGGCC CGGCGCTGGT GCCATCGTCG GCGCGGCGGC TGTCGGTGCG CGGCACGCGG
CTCGTCGAAG GCGCGGGCGT GTCGAAGCGC CAGGGCGGCG CGTTCATGCC GGGCGTGCCC
GATGTGTCGC GCTTTCCGGC GCGCGTGTGG ACGCGGCTGC ACAACAAGTA CTGGCGACGC
CTGCGCCCGG ACCTGCTGAC CTACGCGCCG GGCGGCGGGC TTGCGCTGTT GCGCGAGGCG
CTGGCCGACT ACCTGCGCAC GTCGCGCTCG GTGCGCTGCA CGCCCGAGCA GATCGTGATC
ACGACCGGCA TCCACCAGTC GATCGACCTC GCGGTGCGGC TCCTGACCGA TCCGGGCGAC
GCCATCTGGA CCGAGGATCC GTGCTACTGG GGCGTGCGCA GCGTGCTGAA CGTGTCGGGA
CTGACCACGC GGCCGATTCC GGTCGACGAC GAGGGGATCG CGCCATCGGC CGCCGATCTG
GCCGAGCCGC CGAAGCTGAT GCTCGTCACG CCGTCGCACC AGTATCCGCT CGGGATGGTG
ATGAGCCTCG CGCGGCGGCG GATGCTGCTG GAATACGCGC GCCAGCACGG CTGCTGGATC
ATCGAGGACG ACTACGACAG CGAATTCCGC TACGGCAGCC GCCCGCTTGC GTCGCTGCAG
GGGCTCGATA CGGCCGGGCA GGTGATCTAC GTCGGCAGTT TCGGCAAGAC GCTGTTCCCG
GGGCTGCGGG TCGGCTATCT GGTCGCGCCG GAGCCGCTCG CGGAAAGCTT TGCGACCGCG
AGCGCCGAGC TGTACCGCGA AGGTCAGCTG CTGCAACAGG CCGTGCTCGC CGAGTTCATC
GCCGAAGGGC ACTTCGTGTC GCATATCCGC AAGATGCGCA CGCTGTACGG GCAGCGCCGC
GAGGTGCTGC TCGATGCGGT CGCGCGTCGC TACGGCGATA CGCTGCACGC ACTCGGCAGC
GACGCGGGGC TGCATCTCGT CACGCGGCTG CCGGACGGGG TCGACGATCG CGCGGTCGCG
CAGGCCGCGC TCGAACGCAA TATCGTCGTG CGGCCGCTGT CCGGCTATTA CGCGGAACGC
GAACGCGCGG CGTCGGGCTT GCTGCTCGGC TATGCATGCG TGCCGGAGGA AGAGATCGCG
ACTGCGTTCG CGACGCTCGC CCAGGCGATC GACGAGCGGG CGTTCGGCGA GATCGTGGCG
ACGGTGTGA
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| Protein sequence | MRASVLSDWL AQRLVRGGEQ PIYRQLHRLL QQAILSRELP AGTRVPSSRL LAAELGIARN
TVTQVYEQLA LEGYVNSATG RGTFVADSAP DEIVGAPPDP AAGPALVPSS ARRLSVRGTR
LVEGAGVSKR QGGAFMPGVP DVSRFPARVW TRLHNKYWRR LRPDLLTYAP GGGLALLREA
LADYLRTSRS VRCTPEQIVI TTGIHQSIDL AVRLLTDPGD AIWTEDPCYW GVRSVLNVSG
LTTRPIPVDD EGIAPSAADL AEPPKLMLVT PSHQYPLGMV MSLARRRMLL EYARQHGCWI
IEDDYDSEFR YGSRPLASLQ GLDTAGQVIY VGSFGKTLFP GLRVGYLVAP EPLAESFATA
SAELYREGQL LQQAVLAEFI AEGHFVSHIR KMRTLYGQRR EVLLDAVARR YGDTLHALGS
DAGLHLVTRL PDGVDDRAVA QAALERNIVV RPLSGYYAER ERAASGLLLG YACVPEEEIA
TAFATLAQAI DERAFGEIVA TV
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