Gene BamMC406_5239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5239 
Symbol 
ID6179407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2443333 
End bp2444169 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID641684995 
Producthypothetical protein 
Protein accessionYP_001811900 
Protein GI172064249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACC TCTTCATCGG CCTCGTGCTG TGCTCCGCGC TGCTGCACGC GATCTGGAAT 
GCGTTCCTGC ACGTCAGCGA GGACCGGCTC GTGCAGCTCG GCACGATGTC GCTGCCGTAT
CTCGCATTCG GCGCGGCCGG CGCCGCGCTG CTGCCCGCGC CGGCGCCCGC CGCGTGGCCG
TACATCGCCG CGTCGGCCGC GCTCGAGGTC GCATACTGTT TCACGCTCGC GCGTGCGTAC
CGCAACGGCG AGTTCGGCCA GATCTATCCG ATCGCGCGCG GGATCTCGCC GCTGCTCGTG
TCGGTGCTCG CGCTGGCGGC GCTGCACGAG CGGCCGACCC CGTTCGGCTT CGCGGGTATC
GCGCTGGTGT CGTTCGGCAT CATGTCGCTC GCGCTGCGGC GCGGCTTCAG GTTCTCCGGG
GAAGGCGTGC CGTATGCGCT GCTCACCGGC GTGTTCATCG CCGCGTATTC GATCTGCGAC
GGGATCGGCT CACGCGTGTC CGGCAGCGCG CTCGGCTACA TCGCGTGGGT GTACCTGCTG
TGGAGCGTGC CGCAGCTCGT GCTGGTCTGC GCGGTGCGCG GCGGCCCGCG CGCGGTGCTC
GGTTCGCGCA CCGCGCTCAC GCAGGGCGCG ATCGCCGGCA CGATCTCGCT CGCCGCGTAC
GGAATCGTGA TCCTCGCGTA CCGGCACCTG CCGGTCGCGA CGGTTTCGGC GCTGCGCGAG
ACGAGCTCGA TCTTCGCGGT CGCGATCGGC TGGTTCGTGA TGCGCGAGCG GCCCGGCGCG
CAGCGGCTCG CCGCATGCGC GCTGGTGGTC GCGGGCGCGG CGCTGATCCG GCTTTGA
 
Protein sequence
MDHLFIGLVL CSALLHAIWN AFLHVSEDRL VQLGTMSLPY LAFGAAGAAL LPAPAPAAWP 
YIAASAALEV AYCFTLARAY RNGEFGQIYP IARGISPLLV SVLALAALHE RPTPFGFAGI
ALVSFGIMSL ALRRGFRFSG EGVPYALLTG VFIAAYSICD GIGSRVSGSA LGYIAWVYLL
WSVPQLVLVC AVRGGPRAVL GSRTALTQGA IAGTISLAAY GIVILAYRHL PVATVSALRE
TSSIFAVAIG WFVMRERPGA QRLAACALVV AGAALIRL