Gene BamMC406_5238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5238 
Symbol 
ID6180775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2442160 
End bp2443224 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content72% 
IMG OID641684994 
Productselenophosphate synthetase 
Protein accessionYP_001811899 
Protein GI172064248 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0709] Selenophosphate synthase 
TIGRFAM ID[TIGR00476] selenium donor protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CCACCCTTAC CCCGCCCGCC GTTCCGCGCC TCACGAGCCT GTCGCACGGG 
GGCGGCTGCG GCTGCAAGAT CGCGCCGGGC GTGCTGTCCG AGCTGTTGAA GCGGGCGACG
CCGCCGGCGC TGTTTCCGGA TCTGCTGGTC GGCACCGAGA CCTCCGACGA CGCGGCCGTC
TACCGGTTGA ACGACGAGCA GGCGATCGTC GCGACGACCG ACTTCTTCAT GCCGATTGTC
GACGATCCGT TCGACTTCGG CCGCATCGCG GCGACCAACG CGCTGTCGGA CGTCTACGCG
ATGGGCGGCA AGCCGATTCT CGCGCTCGCG CTGGTCGGGA TGCCGATCAA CGTGCTGCCG
CACGAGACGA TCGCGGCGAT CCTGCGCGGC GGTGAATCGG TGTGCGCGGA GGCCGGTATT
CCGGTCGCGG GCGGCCATTC GATCGATTCG GTCGAGCCGA TCTACGGACT CGCGGCGATC
GGCGTCGTGC ATCCGTCGCG CGTGAAGCGC AACGCGGCCG CGCGCGCGGG CGACGTGCTC
GTGCTCGGCA AGCCGCTCGG CGTCGGCGTG CTGTCGGCCG CGCTGAAGAA GAACCAGCTC
GATGCCGCGG GCTACGCACA GATGGTCGCC ACCACCACCA AGCTGAACCG GCCGGGCGCC
GAGCTCGCCG CGCTGCCGGG CGTGCATGCG CTGACCGACG TCACGGGCTT CGGGCTGCTG
GGCCACACGC TCGAGCTCGC CCGCGGCGCG AACCTCACCG CACGCGTGCA CTATGCGTCG
CTGCCGTGGC TCGCGGGCGT CGAGGCGTTC GTCGCCGACG GCGTGTTCAC CGGTGCGTCG
GGCCGCAACT GGGCCGCGTA CGGCACCGAC GTCCGGCTCG CCGACGGGCT GCCGCCCGTC
GCGCAGGCGC TGCTGACCGA TCCGCAGACA TCGGGCGGGC TGCTGGTCGC GTGTGCGCCG
GAAGCGGTCG ACGACGTGCT CGCATGCTTC CGCGCCGACG GCTTCGACCG CGCGGCCGTG
ATCGGCGAGA TGGTGGACGG GCCTTCACGC GTCGACGTTG CCTGA
 
Protein sequence
MTEATLTPPA VPRLTSLSHG GGCGCKIAPG VLSELLKRAT PPALFPDLLV GTETSDDAAV 
YRLNDEQAIV ATTDFFMPIV DDPFDFGRIA ATNALSDVYA MGGKPILALA LVGMPINVLP
HETIAAILRG GESVCAEAGI PVAGGHSIDS VEPIYGLAAI GVVHPSRVKR NAAARAGDVL
VLGKPLGVGV LSAALKKNQL DAAGYAQMVA TTTKLNRPGA ELAALPGVHA LTDVTGFGLL
GHTLELARGA NLTARVHYAS LPWLAGVEAF VADGVFTGAS GRNWAAYGTD VRLADGLPPV
AQALLTDPQT SGGLLVACAP EAVDDVLACF RADGFDRAAV IGEMVDGPSR VDVA