Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5233 |
Symbol | |
ID | 6179782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2437647 |
End bp | 2438327 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641684989 |
Product | hypothetical protein |
Protein accession | YP_001811894 |
Protein GI | 172064243 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.612479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCGG ACGTGAACCA GCCGGACGGC GGGGACCTCA TGCCCGAGCG CATTTGCGTC GGCGTCGGCG TGACGCGCGA GATCATCGAA GTGTGCGCTT CGTCGATGCG ACTCGTGTTC GGCTACCGGA ACGAGACGTT CGGCATCGAA TCGTTGACCG ATGCGATTGC CGAGTGGTCA CCGACGCTGG TGGTGGTGGA ATCGGCCGGC GGCTACGAGT GCGAAGCGGC GTGCGCGCTG CAGGCGGCAC GCTTGCCGGT GGCGGTCGTT CACCTGCATC AGGCCCGCGC GTTTATCGCA CGCTCGCTGG ACTTGCCGCT CGAGGGGAAA GGGGCCCATG CGCGCATGAT GACGGAACTG GCGTGCATGC TCGATGACGA GCCGTCGAGC GCCCGGTTTG CCGAGCCGCT TGCCGACCCG CAACTGCAGC ATGTCCAGGC GCTGGTGCAG CGCCGGCGGC AACTCGCGCG CACGCTGATG GCGGAATACC AGCTTCTGGC TCGATGCCAC CCGAGCGTGC GCGGCGGGAT CGAGCAGACC ATTGCGTTCC TCAGCAGCCA GATCGGCGTG GTCGAACGTC ACTGTGGACG GCAGGTGCGC GGGCAACGCG TCGGCGCGGC GAGGGCGCTC GCGCGGGTCG TGAGGCGGTC CGGCCGCGCC GCGCGCTCGT CAGGCCGGTG A
|
Protein sequence | MIADVNQPDG GDLMPERICV GVGVTREIIE VCASSMRLVF GYRNETFGIE SLTDAIAEWS PTLVVVESAG GYECEAACAL QAARLPVAVV HLHQARAFIA RSLDLPLEGK GAHARMMTEL ACMLDDEPSS ARFAEPLADP QLQHVQALVQ RRRQLARTLM AEYQLLARCH PSVRGGIEQT IAFLSSQIGV VERHCGRQVR GQRVGAARAL ARVVRRSGRA ARSSGR
|
| |