| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5232 |
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| Symbol | |
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| ID | 6180235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2436589 |
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| End bp | 2437593 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684988 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001811893 |
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| Protein GI | 172064242 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.275923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGC TTCAGGCCAT GCAGGTGTTT ACTCGCGTCG TCGATACAAG CAGCTTCACC
AAGGCAGCAG AAACGCTCGG CCTGCCGCGG GCGTCCGTCA CGACGATCAT CCAGAATCTG
GAAGCTTTCC TCGGCGTGCG CCTGATGCAC CGGACCACGC GCCGGCTGTC GCTCACGCCT
GACGGCGCCG CGTACTACGA AAGGTGCGTG CGGATCCTCG CCGATGTCGA GGAAACCGAA
GCGAGCTTCC AGGCGAACAA TCGCAAGCCG CACGGAAAGT TGCGTATCGA CATGCCGGGC
TCGATCGGAC GGCTGCTCGT GATCCCGTCC CTATGCGAAT TCCATACGCG CTATCCGGAC
ATCGATCTGC AGCTCGGCCT GTCCGACCGG CCGGTCGACC TGCTGCAGGA AGGCGTCGAC
TGCGTGATCC GCGTCGGTGC GCTGCAGGAC TCGTCGCTCG TCGCGCGCCG CGTCGGCCTG
TTCGAATGCG TTTCGGTCGC GGCGCCCGCG TATCTGGAGA AGTACGGCGA ACCGCAGACG
ATCGAGGACC TGAGCGATCA CAAGGCCGTC AATTACTTCT CGAGCCGCAC GGGCCGCACG
ATCGACTGGA CGTTCCTGAC CGACGGCAAG GAAGTCGAGG TCAAGATGAA CGCGATCGTG
TCGGTCAACG ACGCCGACGC GTACGTGACC TGCGGGCTCG AAGGCTTCGG GCTGATCCAG
CCGCCGCTGT TCATGGTGCT GCCGCACCTG CGCGACGGCC GGCTCAAGGA AGTGCTGCCC
GGCCTGAAGC CGCTGCCGAT GCCGATCTCG GTCGTGTATC CGCACAGCCG CCACCTGTCG
CCGAAGGTGC GCGTGTTCGT CGACTGGATC GCCGAAGTGT TCGACCGCTG CCCGCTGCTG
AGCGGCAAGG GCAGCCTCGA CGCGACGTGC AGCAAGCGTA CGTTCGAGGA AGCCGAGCGC
GCGCCGGTGC TCGACACGCC GGTCATCAAC GAGTGGGTCG CGTAA
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| Protein sequence | MDRLQAMQVF TRVVDTSSFT KAAETLGLPR ASVTTIIQNL EAFLGVRLMH RTTRRLSLTP
DGAAYYERCV RILADVEETE ASFQANNRKP HGKLRIDMPG SIGRLLVIPS LCEFHTRYPD
IDLQLGLSDR PVDLLQEGVD CVIRVGALQD SSLVARRVGL FECVSVAAPA YLEKYGEPQT
IEDLSDHKAV NYFSSRTGRT IDWTFLTDGK EVEVKMNAIV SVNDADAYVT CGLEGFGLIQ
PPLFMVLPHL RDGRLKEVLP GLKPLPMPIS VVYPHSRHLS PKVRVFVDWI AEVFDRCPLL
SGKGSLDATC SKRTFEEAER APVLDTPVIN EWVA
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