Gene BamMC406_5225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5225 
Symbol 
ID6180472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2426956 
End bp2427807 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID641684981 
Productalpha/beta hydrolase fold 
Protein accessionYP_001811886 
Protein GI172064235 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC GAATCGAGCC GTCGGTGCTC GCGAACCCGG ACCTGCAATT TGCGACGCTT 
TCGTCGGGCA TCAGCCTGCC GTATGTCGAG CGGGGCAGCG GCGCGCCGAT GGTGTTCGTG
CACGGATCGT TGTGCGACTA CCGCTACTGG GATCCGCAAC TCACGTCGCT GTCGGCACAC
TACCGCTGCA TCGCGCCGAG CCTGAGCCAC TACTGGCCGG CCGTCGAAGC GGGCATCCAG
GACGAGTTCA GCTGGCAGAA CCACGTCGAC GAGCTCGCCG AATTCATCGA CGCACTCGAT
CTCGGCCCCG TGCATCTGGT CGGCCATTCG CGTGGCGGCA GCGTCGCGTT CAACGTCGCG
CGCCAGCACC CGCACCTCGT CGAATCGCTC ACGCTCGCCG ATCCGGGCGG CCCGCTGCAA
CAGCCGGGCG TGCGCGAAGC CGCGCTGCCG GCCGCCGCGA TCGCGCTGCG CACGAAGGCC
GTGAACCTGA TCGGTCAAGG TGACGTGGAA GCCGGGCTCG AGATGTTCGT CGACTCGGTG
AGCCTGCCGG GCGCATGGAA GAAGAGCACG TCGCGCTTTC GCACGATGGC GATCGACAAC
GCGAGCACGC TGCCGAAGCA GCTGCGCGAT CCGCTGCCCG CGTATTCGCA GCACGCGGCG
TCGGATATCG CGTGCCGCAC GCTGCTGATC GACGGCCAGC GCAGCCCGAA GATGTTCCGC
AACAACGTCG ACACGCTGTC GCAGTGGATC GGCGATGCGC AACGGCAGAC CATCGCCGGC
GCGTCGCACG GGATGAACGC GGCAAGCCCC GCGGTGTTCA ACCGTTTCGT GCACGAGTTC
GTCGCCGCGT AA
 
Protein sequence
MNMRIEPSVL ANPDLQFATL SSGISLPYVE RGSGAPMVFV HGSLCDYRYW DPQLTSLSAH 
YRCIAPSLSH YWPAVEAGIQ DEFSWQNHVD ELAEFIDALD LGPVHLVGHS RGGSVAFNVA
RQHPHLVESL TLADPGGPLQ QPGVREAALP AAAIALRTKA VNLIGQGDVE AGLEMFVDSV
SLPGAWKKST SRFRTMAIDN ASTLPKQLRD PLPAYSQHAA SDIACRTLLI DGQRSPKMFR
NNVDTLSQWI GDAQRQTIAG ASHGMNAASP AVFNRFVHEF VAA