| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5221 |
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| Symbol | |
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| ID | 6181311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2422898 |
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| End bp | 2424259 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684977 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001811882 |
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| Protein GI | 172064231 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATG AGATTCGCGT GCTGGTCGTC GAGGACGATG AAAACGTCCG GATCGGCGTC
GAGCAGGCCG TCGCGCTCGC CGGGTTCCCG GTCGACGCAT TCGCGTCGGC CGCCGACGCG
CTCGCGCACG TCGCGCCCGG CGCGCCCATC GTGATCGTGT CGGACGTACG CATGCCCGGC
ATCGACGGGC TGCAGTTGCT CGAACGCGTG ATGGCCGTCG ATGCGCAGAT CCCCGTCGTG
CTGATCAGCG GCCACGCCGA CATTTCGACG GCCGTCGGCG CGATGCACGA CGGCGCGTAC
GACTTCATCG AGAAGCCGTT CTCGTCGGAC GTGATCGCCG GCCGCGTCGC GCGCGCGGTC
GAGAAGCGCC GGCTCACGCT GGAGGTGCAG GGGCTGCGCG CGGCGCTCAA CAACTGGCAG
GGCATCGAGG CGCTCGTGCT CGGCAAGTCG CCAGCGATGG CCGACGTGCG CAAGAAGATC
CTGCGCCTCG CCGATACGTC GGTGTCGGTG CTGATCACCG GCGAGACGGG CACAGGCAAG
GAACTGATCG CACGCAGCCT GCACGACTTC GGCAGCCGGC GCGACGCGCA TTTCGTCGCG
CTGAACTGCG GCGGCCTGCC CGAGCAGATC TTCGAGAGCG AGCTGTTCGG CCACGAGGCC
GGCGCATTCA CCGGCGCGAT CAAGAAGCGC ATCGGCAAGA TCGAATGGGC GCACGGCGGC
ACGCTGTTCC TCGACGAGAT CGAGACGATG CCGATTCCGC TGCAGATCAA GATGCTGCGC
GTGCTGCAGG AGCGCGTGGT CGAACGGCTC GGCGCGAACG AGCTGATTCC GGTCGACTGC
CGCGTCGTCG CCGCATCGAA GGCCGACCTC GCCGAGCTCG CGGCCGACGG GCGCTTTCGC
GCGGACTTGC TGTATCGGCT CAACGTCGCG CAGATCGAGC TGCCGCCGCT GCGCGAACGG
CGCGAGGACG TGCCGCTGCT GTTCGAGCAT TTCGTGCTCG CGGCCGCGCG GCGCTTCGGA
CAGCCGGCGC CCGTCGTCAC GGCTGCACAG GTGTCCGAAC TGATGACGCA TGCGTGGCCC
GGCAACGTGC GCGAACTGCA GAACGTGGCC GACCGCTTCG TGCTCGGCCT GACCGGCGAC
AGCCTGCTGT CGTCCGGCAG CGCGCCGACG GCGGGCGGCA CGCTCGCGGA GCAGCTCGCG
TATTTCGAGC GGATGCTGAT CGAGGACATG CTGCGGCGTC ACAACGGCAA CGTCGCGGAC
GCAAGCGTTG CACTCGGCAT GCCGAAGAAG ACGCTTTATC ACAAGCTGCG CAACCTGCGG
ATTCCCGCGC GCGGCGACGC GGCGGCCGAC GGCGGCGAAT GA
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| Protein sequence | MEDEIRVLVV EDDENVRIGV EQAVALAGFP VDAFASAADA LAHVAPGAPI VIVSDVRMPG
IDGLQLLERV MAVDAQIPVV LISGHADIST AVGAMHDGAY DFIEKPFSSD VIAGRVARAV
EKRRLTLEVQ GLRAALNNWQ GIEALVLGKS PAMADVRKKI LRLADTSVSV LITGETGTGK
ELIARSLHDF GSRRDAHFVA LNCGGLPEQI FESELFGHEA GAFTGAIKKR IGKIEWAHGG
TLFLDEIETM PIPLQIKMLR VLQERVVERL GANELIPVDC RVVAASKADL AELAADGRFR
ADLLYRLNVA QIELPPLRER REDVPLLFEH FVLAAARRFG QPAPVVTAAQ VSELMTHAWP
GNVRELQNVA DRFVLGLTGD SLLSSGSAPT AGGTLAEQLA YFERMLIEDM LRRHNGNVAD
ASVALGMPKK TLYHKLRNLR IPARGDAAAD GGE
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