| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5220 |
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| Symbol | |
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| ID | 6181310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2421013 |
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| End bp | 2422908 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684976 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001811881 |
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| Protein GI | 172064230 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.747879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCGA ATGTGCAGAA GAGCTTCAAG GGAATCCCGT GGTGGGGCTG GGCGTCGGCC
GCCGTGCTGT ATGTCGGCGT GGCGGGCGCG GCCGTCGATT TCGCGTGGGA ACGCGCGATC
GACGCGCTGG AGGAAACCGG CGCGCACCGG CTCGACCTCT ATGCGTCGAG CCTGAAGAGC
GAACTCGGCC GCTTCGAGAT CCTGCCCGGC CTGGTCGCCC GCCAGGACGG CGTGCGCGCG
CTGCTGAAGG CCGCGCCGCC AGACCGGCCC GCGCTCGCCC ACACGGTGAA CACGTACCTC
GAAGCCGTGA ACCGCGACGC GGGCAGCGGC GCCGTCGACG TGATCGACCT GCGCGGCGAA
GTGATCGCCG CCAGCAACTG GAACGAGACG ATCAGCTTCG TCGGCACGAA CGTGTCGTAC
CGGCCGTACT TCAAGGACGC CCTCGCGCAC GGCAGCGGCC GCTTCTTCGG GATCGGCACC
AACACCGGCG TGCCGGGCGT CTACTTCGCG AGCGCGGTGC GCGACGACGG CGTGCCGATC
GGCGCGGCGG CCGTCAAAAT CAGCGTCGAC CCGCTCGAAT CCGCGTGGCG CGCGCCGGGT
GTCGCGGCGA TGGTGGTCGA CGGCAACGGC GTGGTCGTGA TCTCGACCGA GCCGGCGTGG
AAATTCACCG CGCTGCGCCC GATCACCGCG CAGCAGCAGC GCGACATCCA GGCGTCGCGG
CAATACGCGG GCCGCACGGT CGACGTGCTG CCGTACCGCC ACATCGGCGA CCGCAGCGCC
GCCGCGTGGT TCGGCACGTT TCCCGATCCG CGTCACGCCG GCCGCAACAC GCGCTATCTC
GTGATGTCGC GCCCCGCCCC GCAGGCCGGC GATTCGCTGA TGGTGCTGCT CGACATGGCG
AGCGCGCGGC GCCAGCAGGA GACCGCGTTC GTGTTCGTCA CCGGCGCGTT CCTGATCGCC
GCGCTGCTGG CCGGCTACGC GATCCAGCGT CGCCGGGCGA TCGTCGCGCG GCTGAACGCG
CAGGACGCGC TGCGCCGCGC GAACGACCGG CTCGAGCTGA CCGTCGCGCA ACGCACCGCC
GCGCTGACGG CCGCGAACGA GCGGATGCAG CGCGAGATCG TCGAACGCGA GCGCACCGAG
CAGCGGCTGC GCGATTCGCA GCAGGAGGTC GTGCACGCGG GCAAGCTCGC GGTGCTCGGG
CAGATGGCCG CCGGCCTCAC GCACGAGCTG AACCAGCCGC TCGTCGCGAT CCGCACGCTG
TGCGACAACG CGCGCACGTT CTTCGAGCGC GGCCAGCCGG CGCCGGCATA CGCGAATCTC
GAACGGATCG GCAAGCTGGT CGACAGCATG GCGGTGCTCA CCGGCGAGCT GAAGACCTTC
GCGCGCAAGC CCGACGTCGA GCGCGTCGCC GTGTCGCTGA CCGAGGCCGT CGCGCATGCG
CGGCTCATCT ACGATGCGCG GATCCGCGAC GAAGGCGTGC AGCTCGACGT GAACATCGCG
CCCGGCACGA CGGTATCGGC CGAATCGAGC CAGCTGCAGC AGGTGATCGT GAACCTGCTC
GGCAACGCGC TCGATGCGGT GCACGACGCG CCGGTGCGGC GGATCGTCAT CGAAGCCGCC
AAAGTGGACG ACGAGGACGA AGCCGGCCGC GTGCGCTTCA CCGTCGCCGA CAGCGGTGCC
GGCATCGCGC CCGACGTGCT GCCGCACCTG TTCGAGCCGT TCGTCACCAC CAAGCCGCGC
GGCCAGGGCC TCGGGCTCGG CCTCGCGATC ACGTCGCGCA TCGTCGAGGC GTTCGGCGCG
AAGATCGCCG CGACGAACCG CGACGCGGGC GGCGCGCAGT TCACCATCGA ATTCGCGGCG
GCGACGCCGC AGCAAAGGAC AGAGCATGGA AGATGA
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| Protein sequence | MRANVQKSFK GIPWWGWASA AVLYVGVAGA AVDFAWERAI DALEETGAHR LDLYASSLKS
ELGRFEILPG LVARQDGVRA LLKAAPPDRP ALAHTVNTYL EAVNRDAGSG AVDVIDLRGE
VIAASNWNET ISFVGTNVSY RPYFKDALAH GSGRFFGIGT NTGVPGVYFA SAVRDDGVPI
GAAAVKISVD PLESAWRAPG VAAMVVDGNG VVVISTEPAW KFTALRPITA QQQRDIQASR
QYAGRTVDVL PYRHIGDRSA AAWFGTFPDP RHAGRNTRYL VMSRPAPQAG DSLMVLLDMA
SARRQQETAF VFVTGAFLIA ALLAGYAIQR RRAIVARLNA QDALRRANDR LELTVAQRTA
ALTAANERMQ REIVERERTE QRLRDSQQEV VHAGKLAVLG QMAAGLTHEL NQPLVAIRTL
CDNARTFFER GQPAPAYANL ERIGKLVDSM AVLTGELKTF ARKPDVERVA VSLTEAVAHA
RLIYDARIRD EGVQLDVNIA PGTTVSAESS QLQQVIVNLL GNALDAVHDA PVRRIVIEAA
KVDDEDEAGR VRFTVADSGA GIAPDVLPHL FEPFVTTKPR GQGLGLGLAI TSRIVEAFGA
KIAATNRDAG GAQFTIEFAA ATPQQRTEHG R
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