| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5216 |
|---|
| Symbol | |
|---|
| ID | 6180737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 2415586 |
|---|
| End bp | 2416761 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641684972 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001811877 |
|---|
| Protein GI | 172064226 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.329969 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAC TGTTCGATAC GCTGGGTTTC ATCGACGCAT CGGCCGTGCG GGCCCGCGCG
GCGGCACGCG ACGCGCATGG CGCGCCTCTG GAAGCGGCCA TGCGGGCTGA CGTCGCCGCC
GTGTCGCTCG TCCACGTCGG CAAGGTGTTC GCGACGCCGC GCGGCCACGC CGCCGCGCTG
CGCGACGTGA CGCTCGACGT GCGGCGCGGC GAAGTGTTCG GGATCATCGG CCGCAGCGGC
GCCGGCAAGT CGACGCTGCT GCGGCTCGTG AACGGCCTCG AACGTCCGAG TTCGGGCAGC
GTGCGCGTGC AGGGCGTCGA CGTCGGCGCG CTCGACGAGG ACGGGCTCGT CGCGCTGCGC
CGCCGCACCG GGATGGTGTT CCAGCATTTC AACCTGCTGT CGGCGAAGAC GGTGTTAGAG
AACGTCGCGC TGCCGCTGAA GATCGCCGGC GTGCCGAAGG CCGAGCGCAC GCGCAAGGTC
GATGCGTTGC TCGATCTCGT CGGGCTCGCC GCGAAGCGCG ACGCGTATCC GGCGAGCCTG
TCGGGCGGCC AGAAGCAGCG CGTCGGCATC GCGCGGGCGC TGGTGCACGA TCCGGAGGTG
CTGCTGTGCG ACGAGGCGAC GTCGGCGCTC GATCCCGAGA CGACGCAGTC GATCCTCGCA
CTGCTTGCCG ACATCAATCG CCGCCTCGGG CTGACGATCG TGCTGATCAC GCACGAGATG
GAAGTGATCC GCGCGGTGTG CGACACGGTC GCGGTGATCG AGCAGGGCGA GGTGGTCGAA
ACGGGCCCGG TATGGCGAGT GTTCGGCGAT CCGCGCCACG GCGCGACGCG CGCGCTGCTC
AGCACGCTCG TGCATGACCT GCCGGCCGAA CTGGCCGCAC GTGTGCAGCC GTTGCCCGAG
CAGGCCGCAC TGCCGGACGG CGCGCAGGTC GTGCTCGACG TCCGCTATAC GGGCGAAAGC
GGCGGTGAGC CGGACGTCGG CGCGCTCGCG GCGGCGCTCG GCGGCTCGGT GCGTTTCCTG
CATGGCGGGA TCGAGCGGAT CCAGGGGCAT GCGCAGGGGC GCCTCGTGAT CGCCGCGTCG
CCCGGGCAGT CGCTGGCACA CGGCGGTGCG GTCGCTGCGT TGCTGGAGCG CGCGCGCCGC
CATGCGAACC ACGCGGAGGT GCTCGGCTAT GTTTGA
|
|---|
| Protein sequence | MTQLFDTLGF IDASAVRARA AARDAHGAPL EAAMRADVAA VSLVHVGKVF ATPRGHAAAL
RDVTLDVRRG EVFGIIGRSG AGKSTLLRLV NGLERPSSGS VRVQGVDVGA LDEDGLVALR
RRTGMVFQHF NLLSAKTVLE NVALPLKIAG VPKAERTRKV DALLDLVGLA AKRDAYPASL
SGGQKQRVGI ARALVHDPEV LLCDEATSAL DPETTQSILA LLADINRRLG LTIVLITHEM
EVIRAVCDTV AVIEQGEVVE TGPVWRVFGD PRHGATRALL STLVHDLPAE LAARVQPLPE
QAALPDGAQV VLDVRYTGES GGEPDVGALA AALGGSVRFL HGGIERIQGH AQGRLVIAAS
PGQSLAHGGA VAALLERARR HANHAEVLGY V
|
|---|
| |