| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5212 |
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| Symbol | |
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| ID | 6180549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2411001 |
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| End bp | 2412728 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684968 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001811873 |
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| Protein GI | 172064222 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.146936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC ATCAACGAGG GTCGGGAAAT TCCGTACAAC GCGCACCGCG CAAGTCGAAG
ATCGCGCTTG CCGTTACAGT CAGCGCAGCC ATGGTCGCAT TCGCCGCTTC CGCGCCCGCG
CGCGCCGACT ATGTGCAGAA CGGCACGTCG ACCGAAACGT CGGCGGGCTG CGTCGGCAAC
ATCGCCATTT CGGGCAGCAG CACGTATCCG GCCGCGGCAA CCGGCTGCGA CAACGTCGCG
ATCGGCACGG CGGCCGTCGC GAATTCGGGC TCGTCGACCG GCGCCTATAG CGAAACCGTC
GCGATCGGCC GCATGGCGGC CGCGACCGGT ACGTTCGCAA CGGCCGTCGG CGGAAACGCC
GTGGCAACCG GCGACCAGGC GACAGCGATC GGGACGGCTT CGGGCGCAGT CGGCACCCAG
GCCACGGCGG TCGGTAACGG CGCGATCGCG AACGGCGCCA CGGCGTCCGC CTTCGGCCAG
GGCGCATTCG CAGTCGACCA GTCGATAGCG GTCGGTCAAG GCGCGAGCGC CACCGCGACG
TTCTCGACCG CCGTGGGCAA GGGCAGCATT GCAGCGGGCG GTACGGCCCT CGGCTTCCAG
GCAAATGCCG GCGCGGGCGA TGCGGTCGCG CTCGGCGTCG ACAGCTCGGC ATCGGCGACC
GGCAGCGTCG CCATTGCCCG TGCGACGGCC TCCGCCGTGA ACGCGGTCGC CATCGGCGAA
GGGGCGAACG CCGCCGACGC GAATTCCGTC GCGCTGGGCT CGAATGCGAC CACGCGCGCC
TATACGACCG TCAATAGCGT GGCGCTCAAC GGCGTGACCT ACAGCGGCTT CGCGGGCACG
CCGGTGGGCG TGGTCAGCGT CGGCAGCGCG GGTGCCGAGC GTCAGATCGT GAACGTCGCG
GCCGGGGCAA TCAGCGCGAC CAGCACGGAT GCGGTGAACG GCTCGCAGCT CTTCTCGATC
GCCAATCAGG TGTCGACGCT GACGACGGAC CTGGCCAACC TCACGACGAC CGTCGGCAAG
ATCTCGTCCA GCGTCCCGAG CGGCACGGTG ATGGACCCGA CAGACACCGC GATCGGCACG
AACACGTCGG TCACCGCGAC GAACGGCACC GCGGTCGGCA ACGGCTCGAA CGTCTCGGGC
GACAACGGTA CGGCTGTCGG CGTCAACTCC ACGGTCACCG CAACGAACGG AACGGCCATC
GGCACGAATT CGAAAGTCAC TGCGGCCAAC GGAACGGCGA TCGGCACGGG CTCGAATGTG
TCCGGCACGG ACTCGACCGC CATCGGCACG AACAGCCGGG CCACGGCGAA CAACGCGGTG
GCGCTGGGCG CGAATTCGGT TGCCGATCGG GACAACACGG TGTCGATCGG TTCGCCCGGT
GCCGAGCGTC AGCTGACCAA CGTGGCGGAC GGCACCGCGC CGACGGATGG CGTGAACGTG
CGCCAGTTGA ACGGCGCGAT CAACTCCGTG CGCGAGGAAA TGTCGAAGTA CCGCAAGGAC
GCCAACGCGG GCACGGCGAG CGCGATCGCC ATGGCGAACC TGCCGCAAGC CGTGCTGCCT
GGCGAGAAGG TCGTCGCGCT CGGCGGCGGC ACTTACGGCG GTCAAAGCGC CATGGCGGTC
GGCTTGTCCG TCGCGACGGC GAAATGGCTC GTCAAAGGCT CGGTCACGAC GGCGGTGTCG
GGTCACGGCT CGTTCGGCGC CGGCGCGGGC GTCGGCTACC GCTGGTAA
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| Protein sequence | MNKHQRGSGN SVQRAPRKSK IALAVTVSAA MVAFAASAPA RADYVQNGTS TETSAGCVGN
IAISGSSTYP AAATGCDNVA IGTAAVANSG SSTGAYSETV AIGRMAAATG TFATAVGGNA
VATGDQATAI GTASGAVGTQ ATAVGNGAIA NGATASAFGQ GAFAVDQSIA VGQGASATAT
FSTAVGKGSI AAGGTALGFQ ANAGAGDAVA LGVDSSASAT GSVAIARATA SAVNAVAIGE
GANAADANSV ALGSNATTRA YTTVNSVALN GVTYSGFAGT PVGVVSVGSA GAERQIVNVA
AGAISATSTD AVNGSQLFSI ANQVSTLTTD LANLTTTVGK ISSSVPSGTV MDPTDTAIGT
NTSVTATNGT AVGNGSNVSG DNGTAVGVNS TVTATNGTAI GTNSKVTAAN GTAIGTGSNV
SGTDSTAIGT NSRATANNAV ALGANSVADR DNTVSIGSPG AERQLTNVAD GTAPTDGVNV
RQLNGAINSV REEMSKYRKD ANAGTASAIA MANLPQAVLP GEKVVALGGG TYGGQSAMAV
GLSVATAKWL VKGSVTTAVS GHGSFGAGAG VGYRW
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