Gene BamMC406_5211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5211 
Symbol 
ID6180548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2409617 
End bp2410465 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID641684967 
ProductXRE family transcriptional regulator 
Protein accessionYP_001811872 
Protein GI172064221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0654852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGA CCGCCACCGT CCATTCGCTC CCCTCGTCCG CCGGCCGTGC GTCCGGCATC 
GGCCCGCTCC TGCGTACCTG GCGTCAACGC CGGCGCCTGA GCCAGATGGC GCTCGCGCTC
GAGGCGGAGG TGTCCGCGCG ACACCTGAGC TTCGTCGAAT CGGGCCGCGC GCAGCCGAGC
CGCGACATGG TGCTGCATCT CGCGGAGCGC CTCGACGTGC CGCTGCGCGA GCGCAACGCG
CTGCTCGTCG CCGCCGGCTA TGCGCCGCTG TTTCGCGAGC GGCCGTTCTC CGATCCGCAG
CTCGATGCCG CGCGCCACGC AGTCGAGGCC GTGCTACGCG GCCACGAGCC CTACCCGGCA
CTCGCGGTGG ATCGCCACTG GACGCTGCTC GCCGCGAACC GGATGCTCGG CGCGCTGGTC
GCGCAGGCCG ATCCGGCGCT GCTGCAGCCG CCCGTCAACG TGTTGCGGCT GAGCCTGCAT
CCGGACGGCC TCGCGTCGCA GATCGTCAAC TGGCACGAGT GGCGCGCGCA TATCCTGCAC
CGGCTGCAAC GGCAGATCGA CGCGAGCGGC GACCGCGCGC TGCATGCGCT GCGCGACGAA
CTGGCCGACT ATCCGGCGCC GGCCGGCCAG CGCGACGACA TGCATGCACG CACCGACTAT
GCGGACATCG CGGTGCCGCT GCGGCTGCGC ACGGCGGCCG GCGAGCTGAC GTTCTTCAGC
ACGACGACGG TGTTCGGCAC GCCGGTCGAC GTCACGCTGT CGGAGCTCGC GATCGAGGCA
TTTTTTCCGG CGAATCCGGA GACCGTGGAT GCAATGCGCG CACTGGCGGA CGCGTTGCCG
GCGGAGTGA
 
Protein sequence
MNSTATVHSL PSSAGRASGI GPLLRTWRQR RRLSQMALAL EAEVSARHLS FVESGRAQPS 
RDMVLHLAER LDVPLRERNA LLVAAGYAPL FRERPFSDPQ LDAARHAVEA VLRGHEPYPA
LAVDRHWTLL AANRMLGALV AQADPALLQP PVNVLRLSLH PDGLASQIVN WHEWRAHILH
RLQRQIDASG DRALHALRDE LADYPAPAGQ RDDMHARTDY ADIAVPLRLR TAAGELTFFS
TTTVFGTPVD VTLSELAIEA FFPANPETVD AMRALADALP AE