Gene BamMC406_5202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5202 
Symbol 
ID6180225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2400162 
End bp2400647 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID641684958 
Producthypothetical protein 
Protein accessionYP_001811863 
Protein GI172064212 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.730727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.1349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAG CCCTCCTGAT CGTCGACATC CAGCCGACGT TCGCGCCGCC CGAATGGCTC 
GTCACCCGCG TGCGCGCGCT CGTCGGGCGC CTGCCGAGCG TCGCGACGGT CGAGCGTCAC
GACGAAGCGC GCGTGCCGTT CGAGCGGCAG CTCGGCTGGC GTCCGTCCCG CGACGACGAC
AGCCTGATCG CCGCCGATCG CGTGTTCGTC AAGCACGGCT ACGGGCTGCC CGTCGAAGCC
GTCGAGCACT TGCGCGCGCT CGCGCCGGAA CGCGTGCTCG TCTGCGGGAT CCAGACCGAC
ACGTGCGTGC TCGCGGCCGG TTTCGCGCTG TTCGACGCGG GCCTGCACCC GACGCTGCTC
GCGGATCTCA CGGCCGGTTC GTCGCTCGAT CGCAGCGGCG AACTCGGCGT GCGGCTGTGG
AAACATCATT TCGGCCGCGT CGAGTACGCG CATGCGTTGT TCGACCTGCC GAACGACCAC
GCGTAG
 
Protein sequence
MQQALLIVDI QPTFAPPEWL VTRVRALVGR LPSVATVERH DEARVPFERQ LGWRPSRDDD 
SLIAADRVFV KHGYGLPVEA VEHLRALAPE RVLVCGIQTD TCVLAAGFAL FDAGLHPTLL
ADLTAGSSLD RSGELGVRLW KHHFGRVEYA HALFDLPNDH A