Gene BamMC406_5199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5199 
Symbol 
ID6180219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2398397 
End bp2398834 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content65% 
IMG OID641684955 
ProductDoxX family protein 
Protein accessionYP_001811860 
Protein GI172064209 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.342492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.27185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTT CCGTCGATTC CGGCGTCATT TTTTTCGCGC GCCTGGCGCT GGCGGCGTTG 
TTCTTGTGGG GCGGCGTGAT GAAGCTGCTC GGCTACGGCG ATTTCATCGG CTATCTGCAC
GCGCTGAACG TGCCCTATCC GCAGGTGATG GGCCCGATCG TCGTCACGAT CGAAGCGCTC
GGCGGCCTGC TGCTGATCGT CGGCTACAAG GTGAGGCCGC TCGCGTTGCT GCTGGCGTTC
TATACGATCG CGACCGCAAT GGTCGGACAC AATTTCTGGG ACGCGACCGA CGCCGCGGTC
CAGCACGACA TGGTCATCCA CTTCTGGAAG AACGTCGCGA TCGCCGGCGG CTTCCTGTTG
CTGTTCGTGA CGGGCGCCGG CGGCGCGAGC ATCGACGCGC TGCGCCGGCC GAGTTCGTCG
TATGGCGCGC TGCGCTGA
 
Protein sequence
MTRSVDSGVI FFARLALAAL FLWGGVMKLL GYGDFIGYLH ALNVPYPQVM GPIVVTIEAL 
GGLLLIVGYK VRPLALLLAF YTIATAMVGH NFWDATDAAV QHDMVIHFWK NVAIAGGFLL
LFVTGAGGAS IDALRRPSSS YGALR