Gene BamMC406_5191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5191 
Symbol 
ID6179464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2388599 
End bp2389948 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content66% 
IMG OID641684947 
Productmajor facilitator transporter 
Protein accessionYP_001811852 
Protein GI172064201 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.83769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACA CCACCCACAC GAACGCCGCG CCAGCGCAGG CGGCCGGCAC GGTCCGGCGC 
ACGTCGGCGC GCTACAAGAT TCTCGCGCTG CTCGCGATCG GCACGATGAT CAACTATCTC
GACCGTACCG TGCTGGGGGT GGCTGCGCCG CAGCTCACCA AGGAGCTCGG CATCAACGCG
GCGGTGATGG GCATCATGTT CTCCGCGTTC TCGTGGACGT ACGTCGCGAT GCAGGTGCCC
GGCGGCCTGT TCCTCGACCG CTTCGGCAGC AAGGTCACCT ATTACTGGTC GATGACGCTG
TGGTCGCTGT GCACATTCCT GCAGGGCTTC GTGCCGGGCA TCGCGACGCT GCTCGCCTGC
CGGCTCGGCC TCGGCGTGAC GGAGGCGCCG TGCTTCCCGA CCAACAGCCG CGTGGTTGCG
ACCTGGTTCC CGCAGAGCGA GCGCGCGATG GCGACCGGTA CCTATACCGT CGGCGAATAC
ATCGGCCTCG CGTTCTTCAG CCCGGTGCTG TTCGCGTTGA TGGGCGCGTT CGGCTGGCGT
TCGCTGTTCT GGGTCGTCGG CGCGGTCGGT ATCGCGTTCG GCCTGATCTG GTGGAAGTTC
TATCACGAGC CGCGTGATCA TCCGGCCGCG AACTCGGAGG AACTCGCGTA CATCGAGGCG
GGCGGCGGTC TCGTGCACGG CGTGCGCAAG GGCGAGAACG GTGGCAAGGG CGTCAAGGGC
GAACAGAAGA AGTTCAGCTG GGCGATGGCC GGCAAGCTGT TGAAGAAGCG CCAGCTCGCG
GGCATCTGCC TCGGCCAGTT CGCCGGCAAC TCGACGCTCG TGTTCTTCCT GACCTGGTTC
CCGACCTATC TCGCGACCGA GCGCCACATG GGCTGGCTGA AGATCGGCTT CTTCGCGGTG
ATGCCGTTCA TCGCCGCGTC GGTCGGCGTG ATGTTCGGCG GGATCTTCTC CGACTGGCTG
CTGCGTCGCG GCAAGTCGGC GAACCTCGCG CGCAAGCTGC CGATCATCGC CGGCCTGCTG
CTCGCGTCGA CGATCATTCT CGCGAACTAC GTGAAGAGCA ACGAAGCCGT GATCGCGATC
ATGTCGATCG CCTTCTTCGC GCAGGGGATG GCCGCGCTCG GCTGGACGCT CGTGTCCGAC
ATCGCGCCGG ACGGCCTGCT CGGCGTGACG GGCGGCATCT TCAACTTCGC GGCGAACCTC
GCGGGGATCG TCACGCCGCT CGTCGTCGGC TTCATCGTCG CGTCGACCGG TTCGTTCGTC
GGTGCGCTGG TGTTCATCGG CGTGATCGCG CTGATCGGTG CACTGTCGTA CATCTTCGTC
GTCGGCGACA TCAAGCGGAT CGAATTGTAA
 
Protein sequence
MQHTTHTNAA PAQAAGTVRR TSARYKILAL LAIGTMINYL DRTVLGVAAP QLTKELGINA 
AVMGIMFSAF SWTYVAMQVP GGLFLDRFGS KVTYYWSMTL WSLCTFLQGF VPGIATLLAC
RLGLGVTEAP CFPTNSRVVA TWFPQSERAM ATGTYTVGEY IGLAFFSPVL FALMGAFGWR
SLFWVVGAVG IAFGLIWWKF YHEPRDHPAA NSEELAYIEA GGGLVHGVRK GENGGKGVKG
EQKKFSWAMA GKLLKKRQLA GICLGQFAGN STLVFFLTWF PTYLATERHM GWLKIGFFAV
MPFIAASVGV MFGGIFSDWL LRRGKSANLA RKLPIIAGLL LASTIILANY VKSNEAVIAI
MSIAFFAQGM AALGWTLVSD IAPDGLLGVT GGIFNFAANL AGIVTPLVVG FIVASTGSFV
GALVFIGVIA LIGALSYIFV VGDIKRIEL