Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5191 |
Symbol | |
ID | 6179464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2388599 |
End bp | 2389948 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684947 |
Product | major facilitator transporter |
Protein accession | YP_001811852 |
Protein GI | 172064201 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.83769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCACA CCACCCACAC GAACGCCGCG CCAGCGCAGG CGGCCGGCAC GGTCCGGCGC ACGTCGGCGC GCTACAAGAT TCTCGCGCTG CTCGCGATCG GCACGATGAT CAACTATCTC GACCGTACCG TGCTGGGGGT GGCTGCGCCG CAGCTCACCA AGGAGCTCGG CATCAACGCG GCGGTGATGG GCATCATGTT CTCCGCGTTC TCGTGGACGT ACGTCGCGAT GCAGGTGCCC GGCGGCCTGT TCCTCGACCG CTTCGGCAGC AAGGTCACCT ATTACTGGTC GATGACGCTG TGGTCGCTGT GCACATTCCT GCAGGGCTTC GTGCCGGGCA TCGCGACGCT GCTCGCCTGC CGGCTCGGCC TCGGCGTGAC GGAGGCGCCG TGCTTCCCGA CCAACAGCCG CGTGGTTGCG ACCTGGTTCC CGCAGAGCGA GCGCGCGATG GCGACCGGTA CCTATACCGT CGGCGAATAC ATCGGCCTCG CGTTCTTCAG CCCGGTGCTG TTCGCGTTGA TGGGCGCGTT CGGCTGGCGT TCGCTGTTCT GGGTCGTCGG CGCGGTCGGT ATCGCGTTCG GCCTGATCTG GTGGAAGTTC TATCACGAGC CGCGTGATCA TCCGGCCGCG AACTCGGAGG AACTCGCGTA CATCGAGGCG GGCGGCGGTC TCGTGCACGG CGTGCGCAAG GGCGAGAACG GTGGCAAGGG CGTCAAGGGC GAACAGAAGA AGTTCAGCTG GGCGATGGCC GGCAAGCTGT TGAAGAAGCG CCAGCTCGCG GGCATCTGCC TCGGCCAGTT CGCCGGCAAC TCGACGCTCG TGTTCTTCCT GACCTGGTTC CCGACCTATC TCGCGACCGA GCGCCACATG GGCTGGCTGA AGATCGGCTT CTTCGCGGTG ATGCCGTTCA TCGCCGCGTC GGTCGGCGTG ATGTTCGGCG GGATCTTCTC CGACTGGCTG CTGCGTCGCG GCAAGTCGGC GAACCTCGCG CGCAAGCTGC CGATCATCGC CGGCCTGCTG CTCGCGTCGA CGATCATTCT CGCGAACTAC GTGAAGAGCA ACGAAGCCGT GATCGCGATC ATGTCGATCG CCTTCTTCGC GCAGGGGATG GCCGCGCTCG GCTGGACGCT CGTGTCCGAC ATCGCGCCGG ACGGCCTGCT CGGCGTGACG GGCGGCATCT TCAACTTCGC GGCGAACCTC GCGGGGATCG TCACGCCGCT CGTCGTCGGC TTCATCGTCG CGTCGACCGG TTCGTTCGTC GGTGCGCTGG TGTTCATCGG CGTGATCGCG CTGATCGGTG CACTGTCGTA CATCTTCGTC GTCGGCGACA TCAAGCGGAT CGAATTGTAA
|
Protein sequence | MQHTTHTNAA PAQAAGTVRR TSARYKILAL LAIGTMINYL DRTVLGVAAP QLTKELGINA AVMGIMFSAF SWTYVAMQVP GGLFLDRFGS KVTYYWSMTL WSLCTFLQGF VPGIATLLAC RLGLGVTEAP CFPTNSRVVA TWFPQSERAM ATGTYTVGEY IGLAFFSPVL FALMGAFGWR SLFWVVGAVG IAFGLIWWKF YHEPRDHPAA NSEELAYIEA GGGLVHGVRK GENGGKGVKG EQKKFSWAMA GKLLKKRQLA GICLGQFAGN STLVFFLTWF PTYLATERHM GWLKIGFFAV MPFIAASVGV MFGGIFSDWL LRRGKSANLA RKLPIIAGLL LASTIILANY VKSNEAVIAI MSIAFFAQGM AALGWTLVSD IAPDGLLGVT GGIFNFAANL AGIVTPLVVG FIVASTGSFV GALVFIGVIA LIGALSYIFV VGDIKRIEL
|
| |