Gene BamMC406_5187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5187 
Symbol 
ID6179979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand- 
Start bp2384009 
End bp2384929 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content70% 
IMG OID641684943 
Product2-aminoethylphosphonate ABC transporter, permease protein 
Protein accessionYP_001811848 
Protein GI172064197 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR03226] 2-aminoethylphosphonate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.196838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.696708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCT TATCGAGCCC TGAAGCCGGC CTGCCGCCGC AAGCGCTCGC GTCGGCCGCC 
GCGCATGCCG CCGCCGCGCG GCGCCGCAAG CGCATGGGCG ACCTGCACCT TGCCGCGCTT 
GCGCTCGTCG TGCTGGGCCC GCTCGTCGTC TATCCGCTGG TGCGGCTCGT GCTGCTGAGC 
GTGTCCGGCG ATCACGGGCT CAGCTTCGCC GCGTACCGGA CGTTCTTCGG CAACCCCGAT 
ACGCGCGGCG TGCTGCTGAC GAGCGTCGGC GTGCTGTTCG CGAGCGCCGG CACCGCGTCG 
GTGCTCGGCG TGCTGCTGGC CGCGCTGCTG TTCTTCAGGC CGTTCCCGGG CGCATCGCTC 
GTCACGCGTT TCCTGGAACT GTACGTCGCG TTCCCGTCGT TCCTCGTCGC GTTCACGCTG 
ATCTTCCTGT ACGGCTCGCA AGGCTCGATC AGCATCGCGC TGCAGCAACT GTTCCATCTC 
GAGAGCCCGC CGCTCGACTT CCTGTTCGGC ATCGGCGGCG TGATTCTCGC GCAGACCGTG 
TTCTATACGC CGTTCGTCGT GCGGCCGACG CTCGCGTCGT TCGCGACGCT CGACCTGCGC 
CTGATCGAAG CGGCGCGCAG TCTCGGCGCG TCCGGCTGGA TGCTCGCGCG CCGCGTCGTG 
CTGCCGATCG CGTGGCCGGG CATCGCCGCC GGCACCGTGC TGTGCTTCCT GCTGACGCTG 
AACGAGTTCG GGATCCTGCT CGTGCTCGGC AGTGCGCGGC TCGTGACGCT GCCGGTCGCG 
ATCTACAGCA GCGCGACCGT CGACCTCGAC CTGCCGACCG CCTCGGCCGG CGCGGTCGTG 
ATGCTCGCGT TGTCGCTGGC GCTCTATGCG GTTTATCGCC GGGTGAACCG GCGTGCGACG 
GGAGGGAACG ATGTCCGCTG A
 
Protein sequence
MSSLSSPEAG LPPQALASAA AHAAAARRRK RMGDLHLAAL ALVVLGPLVV YPLVRLVLLS 
VSGDHGLSFA AYRTFFGNPD TRGVLLTSVG VLFASAGTAS VLGVLLAALL FFRPFPGASL 
VTRFLELYVA FPSFLVAFTL IFLYGSQGSI SIALQQLFHL ESPPLDFLFG IGGVILAQTV 
FYTPFVVRPT LASFATLDLR LIEAARSLGA SGWMLARRVV LPIAWPGIAA GTVLCFLLTL 
NEFGILLVLG SARLVTLPVA IYSSATVDLD LPTASAGAVV MLALSLALYA VYRRVNRRAT 
GGNDVR