| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5168 |
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| Symbol | |
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| ID | 6181361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2355139 |
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| End bp | 2356815 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684919 |
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| Product | peptidase S10 serine carboxypeptidase |
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| Protein accession | YP_001811829 |
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| Protein GI | 172064178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.100052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCG ATTCCGCATC TTCCGGCGGC GTGTATCCGC TGCATCACGG CGACCACAAT
TCGCATAGCG TGCCGCCGAC CGTCAATCCC GTCGCGCTGA GCCACGGCCG CGACCAGCCG
TTCTTCGATC CGGTCGCGTA CGGCAACGGC CCCGACGACT CGGTGACCGA CACGACCGAA
GCGGCCGCGA TCACGCACCA CACGATCCTG ATCGGCGGCA AGCGGATCGC GTATACGGCA
ACGGTCGGCC ATCTCGTGAC GGTCGACCCG AGCAGTTCGC AGCCGGCCGC GAAGATCTTC
TACGTCGCCT TCACGGCCGA CGGCGCGAAG GAGGAGACGC GGCCCGTCAC GTTCTTCTAC
AACGGCGGGC CCGGTTCGTC GTCGGTGTTC GTGCTGCTCG GCTCGTTCGC GCCGAAGCGC
ATCAAGACGT CGATGCCGGG GTTTACGCCG CCCGCGCCGT ACCAGATCGA AGACAACCCG
GACAGCATGA TCGACCACAG CGACCTGGTG TTCATCAATC CGGTCGGCAC CGGCTATTCG
GCGGCCGTCG CGCCGAACAA GAACCGTAAT TTCTGGGGCG TCGACCAGGA TGCGGATTCG
CTGAAGCAGT TCATCAAGCG CTACCTGACG AAGAACAACC GCTGGAATTC GCCGAAATAC
CTGTTCGGCG AGTCGTATGG CACCGCGCGC AGCTGCGTGC TCGCGTACAA GCTGCACGAG
GACGGCGTCG ACCTGAACGG CGTCACGCTG CAGTCGTCGA TCCTCGACTA CCGGCAGGCC
GGCAACCCGG TCGGCGCGCT GCCGACGGCG GCGGCCGACG CCTGGTATCA CAAGAAGCTT
GGCGTCAAGC CGGCGCCGAC CGATCTCGGC GCGTTCATCG AGGAAGTCGC GCAGTTCGCG
CGCACCGATT ACCTGAAGGC ATTGCGCAAC GTGCCGCATG CCGACCCGGC CGCCGTGCGG
AAGCTGTCGG ACTACACGGG CATCGACACG GCGACGCTGC AGACGTGGGG GCTCGACATC
GCCGGTTACA ACGCGCGCGG CAATTCGCTG TTCCTGACGA CGCTGCTGCA GGCGCAGGGG
CTCGCGCTCG GTTCGTACGA CGGCCGCGTG ACGGCGATCT CGACCGGTAT CGCCGGCAAG
ATCGATCCGA ACTCGGGCGG CAACGATCCG ACGATGACGG CCGTGACGGG TGTCTACACG
GCGATGTGGA ACAGCTACCT GAACGAGCAG TTGAAGTTCA CGTCCAACTC GGCGTTCACG
GACCTGAACG ACCAGGCGTT CCAGAACTGG GACTTCAGCC ATATCGATCC GACCGGCGAG
CAGCAGGGTA TCGACGCGAA GGGGAACGTG ATCCTCTACA CGGCGGGCGA CCTCGCCGCG
GTGATGGCGC TTAACGTCGA CCTGAAGGTG CTGTCGGCGA ACGGCTTGTA CGATTTCGTC
ACGCCGTTCT ACCAGACCGT GATCGACCTG CAGCAGATGC CGCTCGAGGA TCAGAAGGTG
CGGCAGAACC TGTCTGCACG CTTCTATCCG TCGGGGCACA TGGTGTATCT CGACGGCGGG
TCGCGCACCG CGCTCAAGCG CGATCTCGCG ATGATGTACG ACGCGACGGT CAGCGATACG
GGCGCGCGGC TGCGGATTCG CGCGCTGCAG GCGAAGAAGG CGGACGGGCA CGCGTAG
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| Protein sequence | MGIDSASSGG VYPLHHGDHN SHSVPPTVNP VALSHGRDQP FFDPVAYGNG PDDSVTDTTE
AAAITHHTIL IGGKRIAYTA TVGHLVTVDP SSSQPAAKIF YVAFTADGAK EETRPVTFFY
NGGPGSSSVF VLLGSFAPKR IKTSMPGFTP PAPYQIEDNP DSMIDHSDLV FINPVGTGYS
AAVAPNKNRN FWGVDQDADS LKQFIKRYLT KNNRWNSPKY LFGESYGTAR SCVLAYKLHE
DGVDLNGVTL QSSILDYRQA GNPVGALPTA AADAWYHKKL GVKPAPTDLG AFIEEVAQFA
RTDYLKALRN VPHADPAAVR KLSDYTGIDT ATLQTWGLDI AGYNARGNSL FLTTLLQAQG
LALGSYDGRV TAISTGIAGK IDPNSGGNDP TMTAVTGVYT AMWNSYLNEQ LKFTSNSAFT
DLNDQAFQNW DFSHIDPTGE QQGIDAKGNV ILYTAGDLAA VMALNVDLKV LSANGLYDFV
TPFYQTVIDL QQMPLEDQKV RQNLSARFYP SGHMVYLDGG SRTALKRDLA MMYDATVSDT
GARLRIRALQ AKKADGHA
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